PGSC0003DMG400003719 (Solanum tuberosum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 PGSC0003DMG400003719 T024696_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400009534 BBR 1 323
PGSC0003DMT400009535 BBR 1 323
PGSC0003DMT400009536 BBR 5 320
PGSC0003DMT400009537 BBR 5 320

Links

Other BBR family TFs
Other Solanum tuberosum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PROX1 Homo sapiens ENSG00000117707 D 0.000
PROX1 Anolis carolinensis ENSACAG00000006174 I 0.000
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I 0.000
ENSAMEG00000018305 Ailuropoda melanoleuca ENSAMEG00000018305 I 0.000
ENSAMXG00000011717 Astyanax mexicanus ENSAMXG00000011717 I 0.000
ENSAMXG00000012231 Astyanax mexicanus ENSAMXG00000012231 I 0.000
ENSAMXG00000014376 Astyanax mexicanus ENSAMXG00000014376 I 0.000
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I 0.000
PROX1 Bos taurus ENSBTAG00000010978 I 0.000
PROX2 Bos taurus ENSBTAG00000015052 I 0.000
PROX1 Canis familiaris ENSCAFG00000012445 I 0.000
PROX2 Canis familiaris ENSCAFG00000016985 I 0.000
PROX2 Choloepus hoffmanni ENSCHOG00000000477 I 0.000
PROX1 Choloepus hoffmanni ENSCHOG00000010660 I 0.000
PROX1 Callithrix jacchus ENSCJAG00000015514 I 0.000
PROX2 Callithrix jacchus ENSCJAG00000020548 I 0.000
PROX2 Cavia porcellus ENSCPOG00000009322 I 0.000
PROX1 Cavia porcellus ENSCPOG00000011987 I 0.000
ENSCSAG00000012283 Chlorocebus sabaeus ENSCSAG00000012283 I 0.000
ENSCSAG00000015530 Chlorocebus sabaeus ENSCSAG00000015530 I 0.000
prox2 Danio rerio ENSDARG00000041952 I 0.000
prox1a Danio rerio ENSDARG00000055158 I 0.000
prox1b Danio rerio ENSDARG00000088810 I 0.000
PROX1 Dasypus novemcinctus ENSDNOG00000001297 I 0.000
PROX2 Dasypus novemcinctus ENSDNOG00000005528 I 0.000
Prox1 Dipodomys ordii ENSDORG00000007622 I 0.000
PROX1 Equus caballus ENSECAG00000019220 I 0.000
ENSECAG00000023529 Equus caballus ENSECAG00000023529 I 0.000
ENSFALG00000006312 Ficedula albicollis ENSFALG00000006312 I 0.000
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I 0.000
PROX2 Felis catus ENSFCAG00000028658 I 0.000
PROX1 Felis catus ENSFCAG00000029702 I 0.000
PROX2 Homo sapiens ENSG00000119608 I 0.000
prox2 Gasterosteus aculeatus ENSGACG00000007538 I 0.000
prox1a Gasterosteus aculeatus ENSGACG00000010140 I 0.000
ENSGACG00000014345 Gasterosteus aculeatus ENSGACG00000014345 I 0.000
PROX1 Gallus gallus ENSGALG00000009791 I 0.000
PROX1 Gorilla gorilla ENSGGOG00000015130 I 0.000
PROX2 Gorilla gorilla ENSGGOG00000022893 I 0.000
ENSGMOG00000001679 Gadus morhua ENSGMOG00000001679 I 0.000
ENSGMOG00000009022 Gadus morhua ENSGMOG00000009022 I 0.000
ENSGMOG00000011081 Gadus morhua ENSGMOG00000011081 I 0.000
ENSGMOG00000015166 Gadus morhua ENSGMOG00000015166 I 0.000
ENSLACG00000013691 Latimeria chalumnae ENSLACG00000013691 I 0.000
ENSLACG00000018909 Latimeria chalumnae ENSLACG00000018909 I 0.000
PROX1 Loxodonta africana ENSLAFG00000006344 I 0.000
PROX2 Loxodonta africana ENSLAFG00000012545 I 0.000
ENSLOCG00000010701 Lepisosteus oculatus ENSLOCG00000010701 I 0.000
ENSLOCG00000016698 Lepisosteus oculatus ENSLOCG00000016698 I 0.000
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I 0.000
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I 0.000
PROX1 Meleagris gallopavo ENSMGAG00000009635 I 0.000
ENSMICG00000006078 Microcebus murinus ENSMICG00000006078 I 0.000
PROX1 Microcebus murinus ENSMICG00000011593 I 0.000
PROX2 Myotis lucifugus ENSMLUG00000005898 I 0.000
PROX1 Myotis lucifugus ENSMLUG00000006993 I 0.000
PROX1 Macaca mulatta ENSMMUG00000011914 I 0.000
ENSMODG00000006137 Monodelphis domestica ENSMODG00000006137 I 0.000
ENSMPUG00000009289 Mustela putorius furo ENSMPUG00000009289 I 0.000
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I 0.000
Prox1 Mus musculus ENSMUSG00000010175 I 0.000
Prox2 Mus musculus ENSMUSG00000042320 I 0.000
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I 0.000
ENSNLEG00000016325 Nomascus leucogenys ENSNLEG00000016325 I 0.000
PROX2 Ornithorhynchus anatinus ENSOANG00000009815 I 0.000
ENSOARG00000001473 Ovis aries ENSOARG00000001473 I 0.000
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I 0.000
PROX1 Oryctolagus cuniculus ENSOCUG00000008274 I 0.000
PROX2 Oryctolagus cuniculus ENSOCUG00000021246 I 0.000
PROX2 Otolemur garnettii ENSOGAG00000001327 I 0.000
ENSONIG00000012467 Oreochromis niloticus ENSONIG00000012467 I 0.000
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I 0.000
ENSONIG00000015279 Oreochromis niloticus ENSONIG00000015279 I 0.000
ENSONIG00000020193 Oreochromis niloticus ENSONIG00000020193 I 0.000
PROX1 Ochotona princeps ENSOPRG00000005115 I 0.000
PROX2 Ochotona princeps ENSOPRG00000011820 I 0.000
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I 0.000
prox1a Oryzias latipes ENSORLG00000014947 I 0.000
prox2 Oryzias latipes ENSORLG00000016587 I 0.000
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I 0.000
ENSPANG00000024084 Papio anubis ENSPANG00000024084 I 0.000
PROX2 Procavia capensis ENSPCAG00000006424 I 0.000
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I 0.000
ENSPFOG00000014635 Poecilia formosa ENSPFOG00000014635 I 0.000
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I 0.000
ENSPMAG00000006606 Petromyzon marinus ENSPMAG00000006606 I 0.000
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I 0.000
ENSPPYG00000005992 Pongo abelii ENSPPYG00000005992 I 0.000
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I 0.000
ENSPSIG00000017015 Pelodiscus sinensis ENSPSIG00000017015 I 0.000
PROX1 Pan troglodytes ENSPTRG00000001974 I 0.000
PROX2 Pan troglodytes ENSPTRG00000006542 I 0.000
PROX2 Pteropus vampyrus ENSPVAG00000000659 I 0.000
PROX1 Pteropus vampyrus ENSPVAG00000009067 I 0.000
Prox1 Rattus norvegicus ENSRNOG00000003694 I 0.000
Prox2 Rattus norvegicus ENSRNOG00000005054 I 0.000
ENSSHAG00000018304 Sarcophilus harrisii ENSSHAG00000018304 I 0.000
PROX2 Sus scrofa ENSSSCG00000002373 I 0.000
PROX1 Sus scrofa ENSSSCG00000015584 I 0.000
ENSSTOG00000023253 Ictidomys tridecemlineatus ENSSTOG00000023253 I 0.000
PROX2 Tupaia belangeri ENSTBEG00000014423 I 0.000
PROX1 Taeniopygia guttata ENSTGUG00000002974 I 0.000
ENSTGUG00000012170 Taeniopygia guttata ENSTGUG00000012170 I 0.000
ENSTNIG00000004923 Tetraodon nigroviridis ENSTNIG00000004923 I 0.000
ENSTNIG00000016354 Tetraodon nigroviridis ENSTNIG00000016354 I 0.000
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I 0.000
prox2 Tetraodon nigroviridis ENSTNIG00000017414 I 0.000
ENSTRUG00000010061 Takifugu rubripes ENSTRUG00000010061 I 0.000
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I 0.000
prox1a Takifugu rubripes ENSTRUG00000013890 I 0.000
prox2 Takifugu rubripes ENSTRUG00000018353 I 0.000
PROX2 Tursiops truncatus ENSTTRG00000001912 I 0.000
PROX1 Tursiops truncatus ENSTTRG00000003405 I 0.000
PROX2 Vicugna pacos ENSVPAG00000003072 I 0.000
ENSXMAG00000003709 Xiphophorus maculatus ENSXMAG00000003709 I 0.000
ENSXMAG00000004000 Xiphophorus maculatus ENSXMAG00000004000 I 0.000
ENSXMAG00000009972 Xiphophorus maculatus ENSXMAG00000009972 I 0.000
ENSXMAG00000014663 Xiphophorus maculatus ENSXMAG00000014663 I 0.000
Aan_R011488 Calypte anna Aan_R011488 I 0.000
Afo_R004723 Aptenodytes forsteri Afo_R004723 I 0.000
Alligator_sinensis_CCG009660.1 Alligator sinensis Alligator_sinensis_CCG009660.1 I 0.000
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I 0.000
Brh_R001903 Buceros rhinoceros Brh_R001903 I 0.000
Brh_R009461 Buceros rhinoceros Brh_R009461 I 0.000
Cmyd_10008872 Chelonia mydas Cmyd_10008872 I 0.000
Cmyd_10013042 Chelonia mydas Cmyd_10013042 I 0.000
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I 0.000
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I 0.000
ENSP00000355925 Macaca fascicularis ENSP00000355925 I 0.000
ENSP00000405932-D1 Bos grunniens ENSP00000405932-D1 I 0.000
Gfo_R010932 Geospiza fortis Gfo_R010932 I 0.000
Myotis_brandtii_PROX1_10018242 Myotis brandtii Myotis_brandtii_PROX1_10018242 I 0.000
Myotis_brandtii_Prox1_10018243 Myotis brandtii Myotis_brandtii_Prox1_10018243 I 0.000
Myotis_brandtii_PROX2_10012935 Myotis brandtii Myotis_brandtii_PROX2_10012935 I 0.000
Ogr11789 Ophisaurus gracilis Ogr11789 I 0.000
Pvit_00353 Pogona vitticeps Pvit_00353 I 0.000
Pvit_01205 Pogona vitticeps Pvit_01205 I 0.000
Tal_R002989 Tyto alba Tal_R002989 I 0.000
e_gw.483.46.1 Branchiostoma floridae e_gw.483.46.1 I 0.000
prox1 Xenopus tropicalis XB-GENE-485327 I 0.000
prox1.L Xenopus laevis XB-GENE-485331 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000