CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0993s0065
(
Capsella grandiflora
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cagra.0993s0065
T024828_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0993s0065.1.p
BBR
6
229
SQNLMLSAPKANKDAGLRTSNANWFHSYIAVPNTTGVDLSQVSQASPVESMMVPQSRLSHPITVDYRNGVESVEQKSTNQSLSKALKPKTPRKKRATSDKSKKTPSIPETKREKKNLDINIDISSFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPGARLAGRKMSNGAYVKLLVRLAGEGYNLSHPVDLKNHWARHGTNKFVTIK
Links
Other
BBR
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THITE_2120291
Thielavia terrestris
THITE_2120291
N
0.000
MAM_01636
Metarhizium album
MAM_01636
N
0.000
MAPG_08020
Magnaporthe poae
MAPG_08020
N
0.000
MYCTH_2303596
Myceliophthora thermophila
MYCTH_2303596
N
0.000
NechaG46870
Fusarium solani
NechaG46870
N
0.000
NEUTE1DRAFT_81874
Neurospora tetrasperma
NEUTE1DRAFT_81874
N
0.000
PODANS_7_10740
Podospora anserina
PODANS_7_10740
N
0.000
S40285_00400
Stachybotrys chlorohalonata
S40285_00400
N
0.000
S40288_00172
Stachybotrys chartarum
S40288_00172
N
0.000
MAC_06493
Metarhizium acridum
MAC_06493
N
0.000
TRIATDRAFT_279683
Trichoderma atroviride
TRIATDRAFT_279683
N
0.000
TRIREDRAFT_70547
Trichoderma reesei
TRIREDRAFT_70547
N
0.000
TRIVIDRAFT_153443
Trichoderma virens
TRIVIDRAFT_153443
N
0.000
X797_003355
Metarhizium robertsii
X797_003355
N
0.000
e_gw1.10.97.1
Nectria haematococca
e_gw1.10.97.1
N
0.000
estExt_Genewise1Plus.C_50987
Neurospora discreta
estExt_Genewise1Plus.C_50987
N
0.000
NCU00180
Neurospora crassa
NCU00180
N
0.000
estExt_fgenesh1_pg.C_10531
Cryphonectria parasitica
estExt_fgenesh1_pg.C_10531
N
0.000
CTHT_0070820
Chaetomium thermophilum
CTHT_0070820
N
0.000
BBA_06381
Beauveria bassiana
BBA_06381
N
0.000
CCM_05767
Cordyceps militaris
CCM_05767
N
0.000
CFIO01_12198
Colletotrichum fioriniae
CFIO01_12198
N
0.000
CGGC5_2868
Colletotrichum gloeosporioides
CGGC5_2868
N
0.000
CH063_09700
Colletotrichum higginsianum
CH063_09700
N
0.000
CHGG_05609
Chaetomium globosum
CHGG_05609
N
0.000
CMQ_3304
Grosmannia clavigera
CMQ_3304
N
0.000
CSUB01_07638
Colletotrichum sublineola
CSUB01_07638
N
0.000
ACRE_050460
Acremonium chrysogenum
ACRE_050460
N
0.000
F503_02033
Ophiostoma piceae uamh
F503_02033
N
0.000
FFUJ_08528
Fusarium fujikuroi
FFUJ_08528
N
0.000
FGRRES_17667
Fusarium graminearum
FGRRES_17667
N
0.000
FOXG_09502
Fusarium oxysporum
FOXG_09502
N
0.000
FPSE_09317
Fusarium pseudograminearum
FPSE_09317
N
0.000
GGTG_08226
Gaeumannomyces graminis
GGTG_08226
N
0.000
GLRG_08422
Colletotrichum graminicola
GLRG_08422
N
0.000