Cagra.2961s0028 (Capsella grandiflora)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Cagra.2961s0028 T024830_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2961s0028.1.p BBR 1 294
Cagra.2961s0028.2.p BBR 1 294

Links

Other BBR family TFs
Other Capsella grandiflora TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC5 Arabidopsis thaliana AT4G38910 D 0.715
Bo7g119540 Brassica oleracea Bo7g119540 I 0.714
scaffold_200704.1 Arabidopsis lyrata scaffold_200704.1 I 0.800
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 1.000
Bostr.25542s0071 Boechera stricta Bostr.25542s0071 I 0.777
Thhalv10025867m.g Eutrema salsugineum Thhalv10025867m.g I 0.748
BPC4 Arabidopsis thaliana AT2G21240 N 0.901
Bo4g145820 Brassica oleracea Bo4g145820 N 0.741
Bra030308 Brassica rapa Bra030308 N 0.732
BPC4 Arabidopsis lyrata fgenesh2_kg.4__42__AT2G21240.1 N 0.909
Bostr.5022s0111 Boechera stricta Bostr.5022s0111 N 0.978
Carubv10023579m.g Capsella rubella Carubv10023579m.g N 1.000
Thhalv10000273m.g Eutrema salsugineum Thhalv10000273m.g N 0.759