CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbed4
(
Oryzias latipes
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ENSORLG00000011603
T026163_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000014542
BED ZF
31
79
SAVWKHFYLSPADNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHK
ENSORLP00000014542
BED ZF
203
250
SEVWHHFIVSPVDQLKALCRYCPCVISRGKRGDFGTSCLMRHLTRRHP
ENSORLP00000014542
BED ZF
303
351
SKLWNHFSISPADPTKVVCLHCNRTISRGKKTTNLGTSCLFRHMQRFHG
Links
Other
BED ZF
family TFs
Other
Oryzias latipes
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG009321.1
Alligator sinensis
Alligator_sinensis_CCG009321.1
N
TMUE_s0120001200
Trichuris muris
TMUE_s0120001200
N
SROB_0000648801
Schistosoma rodhaini
SROB_0000648801
N
SMTD_0001685401
Schistosoma mattheei
SMTD_0001685401
N
SMRZ_0000087601
Schistosoma margrebowiei
SMRZ_0000087601
N
XP_002156924.1
Hydra magnipapillata
XP_002156924.1
N
gli2
Xenopus tropicalis
XB-GENE-481810
N
SMU15013615
Schmidtea mediterranea
SMU15013615
N
Ogr17074
Ophisaurus gracilis
Ogr17074
N
Myotis_brandtii_GLI3_10009944
Myotis brandtii
Myotis_brandtii_GLI3_10009944
N
ENSP00000379255-D1
Bos grunniens
ENSP00000379255-D1
N
Brh_R006636
Buceros rhinoceros
Brh_R006636
N
ACEP11153
Atta cephalotes
ACEP11153
N
Alligator_sinensis_CCG001512.1
Alligator sinensis
Alligator_sinensis_CCG001512.1
N
Aan_R000709
Calypte anna
Aan_R000709
N
ENSTGUG00000014304
Taeniopygia guttata
ENSTGUG00000014304
N
GLI2
Tupaia belangeri
ENSTBEG00000008264
N
ENSPMAG00000007806
Petromyzon marinus
ENSPMAG00000007806
N
ENSORLG00000015277
Oryzias latipes
ENSORLG00000015277
N
gli2b
Oryzias latipes
ENSORLG00000001328
N
ENSMICG00000005378
Microcebus murinus
ENSMICG00000005378
N
Aqu1.217717
Amphimedon queenslandica
Aqu1.217717
N
ACYPI45156
Acyrthosiphon pisum
ACYPI45156
N