CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMU15013615
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15013615
T145117_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15013615
C2H2 ZF
49
76
YICQWNNCGRNKKPFKAQYMLVVHMRRH
SMU15013615
C2H2 ZF
82
106
HKCEYSNCDKCYSRLENLKTHIRTH
SMU15013615
C2H2 ZF
112
137
YNCEFVSCNKRFSNASDRAKHQNRTH
SMU15013615
C2H2 ZF
143
168
YFCKVDGCLKRYTDPSSLRKHVKTNH
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI45156
Acyrthosiphon pisum
ACYPI45156
N
0.778
ENSORLG00000015277
Oryzias latipes
ENSORLG00000015277
N
0.775
ACEP11153
Atta cephalotes
ACEP11153
N
0.772
gli2b
Oryzias latipes
ENSORLG00000001328
N
0.772
ENSTGUG00000014304
Taeniopygia guttata
ENSTGUG00000014304
N
0.772
Aan_R000709
Calypte anna
Aan_R000709
N
0.772
Alligator_sinensis_CCG001512.1
Alligator sinensis
Alligator_sinensis_CCG001512.1
N
0.772
Alligator_sinensis_CCG009321.1
Alligator sinensis
Alligator_sinensis_CCG009321.1
N
0.772
Brh_R006636
Buceros rhinoceros
Brh_R006636
N
0.772
Cflo_10733--XP_624136.2_APIME
Camponotus floridanus
Cflo_10733--XP_624136.2_APIME
N
0.772
ENSP00000379255-D1
Bos grunniens
ENSP00000379255-D1
N
0.772
Myotis_brandtii_GLI3_10009944
Myotis brandtii
Myotis_brandtii_GLI3_10009944
N
0.772
Ogr17074
Ophisaurus gracilis
Ogr17074
N
0.772
gli2
Xenopus tropicalis
XB-GENE-481810
N
0.772
SMRZ_0000087601
Schistosoma margrebowiei
SMRZ_0000087601
N
0.772
SMTD_0001685401
Schistosoma mattheei
SMTD_0001685401
N
0.772
SROB_0000648801
Schistosoma rodhaini
SROB_0000648801
N
0.772
GLI2
Tupaia belangeri
ENSTBEG00000008264
N
0.770
Aqu1.217717
Amphimedon queenslandica
Aqu1.217717
N
0.767
ENSPMAG00000007806
Petromyzon marinus
ENSPMAG00000007806
N
0.767
XP_002156924.1
Hydra magnipapillata
XP_002156924.1
N
0.757