chinmo (Drosophila pseudoobscura)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 FBgn0076394 T026351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285177 BED ZF 492 537

Links

Other BED ZF family TFs
Other Drosophila pseudoobscura TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00236 Aquilegia coerulea Aquca_005_00236 N
Traes_2AS_2C198FE96 Triticum aestivum Traes_2AS_2C198FE96 N
Traes_2BS_999491428 Triticum aestivum Traes_2BS_999491428 N
Traes_2DS_BCB7C3C11 Triticum aestivum Traes_2DS_BCB7C3C11 N
TRIUR3_21656 Triticum urartu TRIUR3_21656 N
VIT_19s0090g01770 Vitis vinifera VIT_19s0090g01770 N
Cla003344 Citrullus lanatus Cla003344 N
Pm029551 Prunus mume Pm029551 N
Cucsa.304690 Cucumis sativus Cucsa.304690 N
Solyc12g015640.1 Solanum lycopersicum Solyc12g015640.1 N
Ciclev10008511m.g Citrus clementina Ciclev10008511m.g N
gene03554-v1.0-hybrid Fragaria vesca gene03554-v1.0-hybrid N
Lus10003775.g Linum usitatissimum Lus10003775.g N
orange1.1g010604m.g Citrus sinensis orange1.1g010604m.g N
Pavir.Bb03222 Panicum virgatum Pavir.Bb03222 N
Pavir.J07102 Panicum virgatum Pavir.J07102 N
PDK_20s1307431g001 Phoenix dactylifera PDK_20s1307431g001 N
OBART07G20100 Oryza barthii OBART07G20100 N
BGIOSGA026020 Oryza indica BGIOSGA026020 N
BRADI1G23400 Brachypodium distachyon BRADI1G23400 N
F775_02643 Aegilops tauschii F775_02643 N
GRMZM2G130773 Zea mays GRMZM2G130773 N
GSMUA_Achr3G29890_001 Musa acuminata GSMUA_Achr3G29890_001 N
LPERR07G17420 Leersia perrieri LPERR07G17420 N
MLOC_4927 Hordeum vulgare MLOC_4927 N
OB07G25840 Oryza brachyantha OB07G25840 N
AMTR_s00088p00159600 Amborella trichopoda AMTR_s00088p00159600 N
OGLUM07G19880 Oryza glumaepatula OGLUM07G19880 N
OMERI07G16780 Oryza meridionalis OMERI07G16780 N
OPUNC07G18990 Oryza punctata OPUNC07G18990 N
OS07G0583200 Oryza sativa OS07G0583200 N
PRUPE_ppa006059m1g Prunus persica PRUPE_ppa006059m1g N
PRUPE_ppa015320mg Prunus persica PRUPE_ppa015320mg N
Si029526m.g Setaria italica Si029526m.g N