Pavir.J07102 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.J07102 T265076_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07102.1.p mTERF 168 274
Pavir.J07102.1.p mTERF 261 474

Links

Other mTERF family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb03222 Panicum virgatum Pavir.Bb03222 N 0.978
OGLUM07G19880 Oryza glumaepatula OGLUM07G19880 N 0.920
OS07G0583200 Oryza sativa OS07G0583200 N 0.920
BGIOSGA026020 Oryza indica BGIOSGA026020 N 0.917
OMERI07G16780 Oryza meridionalis OMERI07G16780 N 0.913
OB07G25840 Oryza brachyantha OB07G25840 N 0.894
Si029526m.g Setaria italica Si029526m.g N 0.891
GRMZM2G130773 Zea mays GRMZM2G130773 N 0.881
MLOC_4927 Hordeum vulgare MLOC_4927 N 0.878
BRADI1G23400 Brachypodium distachyon BRADI1G23400 N 0.877
F775_02643 Aegilops tauschii F775_02643 N 0.872
Traes_2DS_BCB7C3C11 Triticum aestivum Traes_2DS_BCB7C3C11 N 0.872
Sb02g037620 Sorghum bicolor Sb02g037620 N 0.865
Traes_2BS_999491428 Triticum aestivum Traes_2BS_999491428 N 0.863
TRIUR3_21656 Triticum urartu TRIUR3_21656 N 0.833
OBART07G20100 Oryza barthii OBART07G20100 N 0.821
OPUNC07G18990 Oryza punctata OPUNC07G18990 N 0.818
LPERR07G17420 Leersia perrieri LPERR07G17420 N 0.814
Aquca_005_00236 Aquilegia coerulea Aquca_005_00236 N 0.777
Traes_2AS_2C198FE96 Triticum aestivum Traes_2AS_2C198FE96 N 0.761
Ciclev10008511m.g Citrus clementina Ciclev10008511m.g N 0.734
orange1.1g010604m.g Citrus sinensis orange1.1g010604m.g N 0.734
GSMUA_Achr3G29890_001 Musa acuminata GSMUA_Achr3G29890_001 N 0.728
Lus10003775.g Linum usitatissimum Lus10003775.g N 0.725
PDK_20s1307431g001 Phoenix dactylifera PDK_20s1307431g001 N 0.721
gene03554-v1.0-hybrid Fragaria vesca gene03554-v1.0-hybrid N 0.717
Cla003344 Citrullus lanatus Cla003344 N 0.702