CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0019s00470
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0019s00470
T027387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s00470.1
BED ZF
6
54
DPFWDHVEKLDDGRFNCKFCGYKFAAATSVTMIKWHLSGVQGRGVTICR
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s00510
Populus trichocarpa
POPTR_0019s00510
N
0.762
POPTR_0019s03720
Populus trichocarpa
POPTR_0019s03720
N
0.714
POPTR_0031s00230
Populus trichocarpa
POPTR_0031s00230
N
0.714
POPTR_0031s00260
Populus trichocarpa
POPTR_0031s00260
N
0.976
POPTR_0031s00430
Populus trichocarpa
POPTR_0031s00430
N
0.810
SapurV1A.1086s0080
Salix purpurea
SapurV1A.1086s0080
N
0.786