CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0031s00230
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0031s00230
T027405_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0031s00230.1
BED ZF
6
54
DRFWDHVEKLDDGRFNCTFCGFKFAAAASISRIKWHLSGEEGHGVAVCG
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s00540
Populus trichocarpa
POPTR_0019s00540
N
0.976
POPTR_0019s00510
Populus trichocarpa
POPTR_0019s00510
N
0.854
POPTR_0031s00260
Populus trichocarpa
POPTR_0031s00260
N
0.738
POPTR_0019s00470
Populus trichocarpa
POPTR_0019s00470
N
0.714
POPTR_0031s00210
Populus trichocarpa
POPTR_0031s00210
N
0.703