CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb02430
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Eb02430
T028476_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb02430.1.p
BED ZF
5
51
DVVWEHGENIYPGWRCNYCLMQKGGGGATRLKQHLAGRGAEVVHCRN
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_08996
Coccidioides immitis
CIMG_08996
N
COCC4DRAFT_129006
Bipolaris maydis
COCC4DRAFT_129006
N
COCC4DRAFT_59703
Bipolaris maydis
COCC4DRAFT_59703
N
COCCADRAFT_9786
Bipolaris zeicola
COCCADRAFT_9786
N
COCMIDRAFT_103844
Bipolaris oryzae
COCMIDRAFT_103844
N
COCSADRAFT_132427
Bipolaris sorokiniana
COCSADRAFT_132427
N
COCSADRAFT_39027
Bipolaris sorokiniana
COCSADRAFT_39027
N
COCVIDRAFT_30822
Bipolaris victoriae
COCVIDRAFT_30822
N
COCVIDRAFT_97594
Bipolaris victoriae
COCVIDRAFT_97594
N
GMDG_08032
Pseudogymnoascus destructans
GMDG_08032
N
HCBG_03186
Histoplasma capsulatum
HCBG_03186
N
SETTUDRAFT_161140
Setosphaeria turcica
SETTUDRAFT_161140
N
gw1.6.260.1
Cochliobolus heterostrophus C5
gw1.6.260.1
N