CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb02430
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Eb02430
T028476_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb02430.1.p
BED ZF
5
51
DVVWEHGENIYPGWRCNYCLMQKGGGGATRLKQHLAGRGAEVVHCRN
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab02036
Panicum virgatum
Pavir.Ab02036
N
0.925
Pavir.Eb03508
Panicum virgatum
Pavir.Eb03508
N
0.925
Pavir.J30108
Panicum virgatum
Pavir.J30108
N
0.825
Pavir.Da02063
Panicum virgatum
Pavir.Da02063
N
0.800
ORGLA06G0118700
Oryza glaberrima
ORGLA06G0118700
N
0.725
OS06G0328650
Oryza sativa
OS06G0328650
N
0.725