CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb03508
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Eb03508
T028480_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb03508.1.p
BED ZF
56
103
DVVWEHGENLYPGWRCNYCRTQKGGGGATRLKQHLAGRGAEVVHCRNV
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab02036
Panicum virgatum
Pavir.Ab02036
N
1.000
Pavir.Eb02430
Panicum virgatum
Pavir.Eb02430
N
0.925
Pavir.Da02063
Panicum virgatum
Pavir.Da02063
N
0.875
Pavir.J30108
Panicum virgatum
Pavir.J30108
N
0.872
ORGLA06G0118700
Oryza glaberrima
ORGLA06G0118700
N
0.725
OS06G0328650
Oryza sativa
OS06G0328650
N
0.725