CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J16977
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J16977
T028585_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J16977.1.p
BED ZF
2
48
SKVWKYIEQDLVMVVDVWKAVCKYCGLRLGAQSGTSSLRSHIATTCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ea03497
Panicum virgatum
Pavir.Ea03497
N
1.000
Pavir.J07559
Panicum virgatum
Pavir.J07559
N
0.909
Pavir.J15759
Panicum virgatum
Pavir.J15759
N
0.970
Pavir.J29765
Panicum virgatum
Pavir.J29765
N
0.909
Pavir.J32094
Panicum virgatum
Pavir.J32094
N
0.909
Pavir.J36827
Panicum virgatum
Pavir.J36827
N
0.932
Pavir.J39807
Panicum virgatum
Pavir.J39807
N
0.909