CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J39807
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J39807
T028644_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J39807.1.p
BED ZF
28
74
SKVWQFFEQDLVMVDDVWKAVCKYCGLRLGAQSGTSSLRSHIATTCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ea03497
Panicum virgatum
Pavir.Ea03497
N
1.000
Pavir.J07559
Panicum virgatum
Pavir.J07559
N
1.000
Pavir.J15759
Panicum virgatum
Pavir.J15759
N
1.000
Pavir.J29765
Panicum virgatum
Pavir.J29765
N
1.000
Pavir.J32094
Panicum virgatum
Pavir.J32094
N
1.000
Pavir.J36827
Panicum virgatum
Pavir.J36827
N
0.932
Pavir.J16977
Panicum virgatum
Pavir.J16977
N
0.909