CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SVE_0384200
(
Strongyloides venezuelensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
SVE_0384200
T029728_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0384200.1
BED ZF
81
126
HPVWIFFKDLKDEETNKHGIICLHCKWKGTDKSPNYLQVHLKKFHS
Links
Other
BED ZF
family TFs
Other
Strongyloides venezuelensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G10380
Leersia perrieri
LPERR02G10380
N
LPERR02G10770
Leersia perrieri
LPERR02G10770
N
OB03G33030
Oryza brachyantha
OB03G33030
N
OBART03G24330
Oryza barthii
OBART03G24330
N
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
OGLUM08G16100
Oryza glumaepatula
OGLUM08G16100
N
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
OMERI08G12590
Oryza meridionalis
OMERI08G12590
N
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
OPUNC03G22520
Oryza punctata
OPUNC03G22520
N
OPUNC08G12800
Oryza punctata
OPUNC08G12800
N
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
ORUFI03G24940
Oryza rufipogon
ORUFI03G24940
N