CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI08G12590
(
Oryza meridionalis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OMERI08G12590
T255203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI08G12590.1
MADS box
10
55
RIINDAKRRAAFKKRLKGLKKKASELSTLCSVDTCLMVYGEGEVQA
Links
Other
MADS box
family TFs
Other
Oryza meridionalis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM08G16100
Oryza glumaepatula
OGLUM08G16100
N
1.000
ONIVA08G16460
Oryza nivara
ONIVA08G16460
N
0.978
OBART08G15340
Oryza barthii
OBART08G15340
N
0.957
OPUNC08G12800
Oryza punctata
OPUNC08G12800
N
0.957
OBART03G24330
Oryza barthii
OBART03G24330
N
0.787
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
0.787
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
0.787
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
0.787
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
0.787
ORUFI03G24940
Oryza rufipogon
ORUFI03G24940
N
0.783
OB03G33030
Oryza brachyantha
OB03G33030
N
0.761
OPUNC03G22520
Oryza punctata
OPUNC03G22520
N
0.761
LPERR02G10380
Leersia perrieri
LPERR02G10380
N
0.739
LPERR02G10770
Leersia perrieri
LPERR02G10770
N
0.739
LPERR02G10620
Leersia perrieri
LPERR02G10620
N
0.717
OB01G21750
Oryza brachyantha
OB01G21750
N
0.717