MYC4 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT4G17880 T030672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC4
M01707_2.00		 Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.914 0.979
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.914 0.958
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.914 0.958
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.914 0.938
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.890 0.875
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.858 0.583
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.646
BHLH14
M09785_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G00870_01 		0.840 0.771
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01707_2.00 bHLH 52 99

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G17880.1 bHLH 415 462

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA024846 Oryza indica BGIOSGA024846 N
GRMZM2G051793 Zea mays GRMZM2G051793 N
LPERR07G02310 Leersia perrieri LPERR07G02310 N
OB07G12010 Oryza brachyantha OB07G12010 N
OBART07G02450 Oryza barthii OBART07G02450 N
OGLUM07G14260 Oryza glumaepatula OGLUM07G14260 N
OLONG_009970 Oryza longistaminata OLONG_009970 N
OMERI01G11970 Oryza meridionalis OMERI01G11970 N
ONIVA04G19340 Oryza nivara ONIVA04G19340 N
OPUNC07G02500 Oryza punctata OPUNC07G02500 N
ORGLA07G0021600 Oryza glaberrima ORGLA07G0021600 N
ORUFI07G02320 Oryza rufipogon ORUFI07G02320 N
Si028919m.g Setaria italica Si028919m.g N
Pavir.Ba03827 Panicum virgatum Pavir.Ba03827 N
Pavir.Bb00243 Panicum virgatum Pavir.Bb00243 N