CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG10881
(
Caenorhabditis briggsae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CBG10881
T031928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mdl-1
M08183_2.00
Caenorhabditis elegans
CACGTGAY
RTCACGTG
ChIP-seq
Contrino et al.(2012)
Mw156
0.914
0.942
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG10881
bHLH
97
149
SRAAHNELEKTRRANLRGCLETLKVLVPCVTDATRNTTLALLTRARDHIIELQ
Links
Other
bHLH
family TFs
Other
Caenorhabditis briggsae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mdl-1
Caenorhabditis elegans
WBGene00003163
D
0.914
CBN24539
Caenorhabditis brenneri
CBN24539
I
0.914
CJA08920
Caenorhabditis japonica
CJA08920
I
0.914
ACAC_0000575701
Angiostrongylus cantonensis
ACAC_0000575701
I
0.860
DICVIV_06590
Dictyocaulus viviparus
DICVIV_06590
I
0.860
HCOI00642400
Haemonchus contortus
HCOI00642400
I
0.860
HPLM_0001847601
Haemonchus placei
HPLM_0001847601
I
0.860
TELCIR_11825
Teladorsagia circumcincta
TELCIR_11825
I
0.860