CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSAMXG00000025568 *(Astyanax mexicanus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSAMXG00000025568	T032956_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ASCL1 M04135_2.00	Homo sapiens	NRCASSTGYN	NRCASSTGYN	SELEX Yin et al.(2017) ASCL1_eDBD_HT-SELEX	0.849	0.900
ASCL1 M08055_2.00	Homo sapiens	NNRGCAGCTGSNN	NNSCAGCTGCYNN	ChIP-seq Mathelier et al.(2014) MA1100.1	0.849	0.900
ASCL1 M08730_2.00	Homo sapiens	NNVCASCTGCYBYN	NRVRGCAGSTGBNN	Misc Kulakovskiy et al.(2013) ASCL1_HUMAN.H11MO.0.A	0.849	0.900
Ascl1 M08748_2.00	Mus musculus	BHSCASCTGCYBBN	NVVRGCAGSTGSDV	Misc Kulakovskiy et al.(2013) ASCL1_MOUSE.H11MO.0.A	0.849	0.900
Ascl1 M09464_2.00	Mus musculus	NVCABCTGBBNN	NNVVCAGVTGBN	Misc Heinz et al.(2010) NeuralTubes-Ascl1_GSE55840	0.849	0.900
ASCL1 M09855_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MASH1_Q6_01	0.849	0.900
ASCL1 M09856_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MASH1_Q6_02	0.849	0.900
ASCL1 M09857_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MASH1_Q6	0.849	0.900
ASCL1 M04136_2.00	Homo sapiens	NRCAGCTGYN	NRCAGCTGYN	SELEX Yin et al.(2017) ASCL1_eDBD_Methyl-HT-SELEX	0.849	0.900
For this family, TFs with SR scores > 0.838* will likely have a similar motif*