TFEB (Equus caballus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSECAG00000019762 T033961_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfeb
M01728_2.00 		Mus musculus
CWCGTGAY
RTCACGWG		 PBM
Weirauch et al.(2014)
pTH5072 		0.914 1.000
TFEB
M02781_2.00 		Homo sapiens
RNCACGTGAY
RTCACGTGNY		 SELEX
Jolma et al.(2013)
TFEB_1 		0.914 1.000
TFEB
M02727_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2010)
TFEB_dimer 		0.914 1.000
TFEB
M04088_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX 		0.914 1.000
TFEB
M08718_2.00 		Homo sapiens
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C 		0.914 1.000
Tfeb
M08753_2.00 		Mus musculus
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C 		0.914 1.000
TFEB
M04089_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX 		0.914 1.000
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.855 0.889
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.855 0.889
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.855 0.889
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.855 0.889
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.855 0.889
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.855 0.889
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.855 0.889
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.855 0.870
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.855 0.870
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.855 0.870
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.855 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000017351 bHLH 248 301

Links

Other bHLH family TFs
Other Equus caballus TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK20225.1 Cannabis sativa PK20225.1 D 0.000
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.000
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.000
TCM_029711 Theobroma cacao TCM_029711 I 0.000
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.000
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.000
29900.m001610 Ricinus communis 29900.m001610 I 0.000
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.000
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.000
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.000
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.000
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.000
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.000
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.000
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
MDP0000249969 Malus domestica MDP0000249969 I 0.000
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.000
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.000
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.000
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.000
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.000
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.000
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.000
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.000
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.000
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.000
OB01G17480 Oryza brachyantha OB01G17480 I 0.000
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.000
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.000
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.000
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.000
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.000
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.000
OS01G0218100 Oryza sativa OS01G0218100 I 0.000
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.000
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.000
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.000
GSMUA_Achr10G14370_001 Musa acuminata GSMUA_Achr10G14370_001 N 0.000
MDP0000256492 Malus domestica MDP0000256492 N 0.000
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.000
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.000