CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000003396
(
Ficedula albicollis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSFALG00000003396
T034101_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIF1A
M08049_2.00
Homo sapiens
NBACGTGCNN
NNGCACGTVN
ChIP-seq
Mathelier et al.(2014)
MA1106.1
0.857
0.887
HIF1A
M08713_2.00
Homo sapiens
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C
0.857
0.887
Hif1a
M08750_2.00
Mus musculus
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C
0.857
0.887
HIF1A
M09454_2.00
Homo sapiens
KACGTGMN
NKCACGTM
Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352
0.857
0.887
HIF1A
M09807_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q3
0.857
0.887
HIF1A
M09808_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q5
0.857
0.887
HIF1A
M09809_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q6
0.857
0.887
HIF1A
M09810_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q3
0.857
0.887
HIF1A
M09811_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q5
0.857
0.887
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000003555
bHLH
19
71
RKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMR
Links
Other
bHLH
family TFs
Other
Ficedula albicollis
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMPUG00000006870
Mustela putorius furo
ENSMPUG00000006870
I
HES2
Otolemur garnettii
ENSOGAG00000024214
I
HES2
Procavia capensis
ENSPCAG00000007135
I
ENSSTOG00000013642
Ictidomys tridecemlineatus
ENSSTOG00000013642
I
ENSBTAP00000028261-D1
Bos grunniens
ENSBTAP00000028261-D1
I
ENSAMEG00000009788
Ailuropoda melanoleuca
ENSAMEG00000009788
N
HES2
Canis familiaris
ENSCAFG00000019577
N
HES2
Equus caballus
ENSECAG00000023427
N
ENSLACG00000016859
Latimeria chalumnae
ENSLACG00000016859
N
HES2
Ornithorhynchus anatinus
ENSOANG00000014690
N