MSGN1 (Felis catus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSFCAG00000013583 T034202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSGN1
M04144_2.00 		Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX 		0.914 1.000
Msgn1
M08772_2.00 		Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN		 Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C 		0.914 1.000
MSGN1
M04145_2.00 		Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000012593 bHLH 125 179

Links

Other bHLH family TFs
Other Felis catus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_06472 Phytophthora parasitica F443_06472 N
fgenesh_scip_prom.28083.7841 Phytophthora lateralis fgenesh_scip_prom.28083.7841 N
fgenesh_scip_prom.46568.5451 Phytophthora kernoviae fgenesh_scip_prom.46568.5451 N
HpaG808904 Hyaloperonospora arabidopsidis HpaG808904 N
maker-pag1_scaffold_16-fgenesh-gene-1.3 Pythium aphanidermatum maker-pag1_scaffold_16-fgenesh-gene-1.3 N
maker-par_contig_435-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_435-fgenesh-gene-0.0 N
maker-pir_contig_135-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_135-fgenesh-gene-0.6 N
maker-piw_contig_221-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_221-fgenesh-gene-0.2 N
Phyra85870 Phytophthora ramorum Phyra85870 N
Phyra87850 Phytophthora ramorum Phyra87850 N
PITG_05406 Phytophthora infestans PITG_05406 N
estExt_fgenesh1_kg.C_20917 Phytophthora capsici estExt_fgenesh1_kg.C_20917 N