CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.5451
(
Phytophthora kernoviae
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
fgenesh_scip_prom.46568.5451
T320066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.5451
RWP-RK
8
55
DFELSELQKYYHLPLREAARRLGSCEAVVKRVCRRKQIQRWPYRQVSS
Links
Other
RWP-RK
family TFs
Other
Phytophthora kernoviae
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_06472
Phytophthora parasitica
F443_06472
N
1.000
fgenesh_scip_prom.28083.7841
Phytophthora lateralis
fgenesh_scip_prom.28083.7841
N
1.000
Phyra85870
Phytophthora ramorum
Phyra85870
N
1.000
Phyra87850
Phytophthora ramorum
Phyra87850
N
1.000
PITG_05406
Phytophthora infestans
PITG_05406
N
1.000
estExt_fgenesh1_kg.C_20917
Phytophthora capsici
estExt_fgenesh1_kg.C_20917
N
1.000
HpaG808904
Hyaloperonospora arabidopsidis
HpaG808904
N
0.979
PYU1_G005435
Pythium ultimum
PYU1_G005435
N
0.938
maker-pir_contig_135-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_135-fgenesh-gene-0.6
N
0.917
maker-pag1_scaffold_16-fgenesh-gene-1.3
Pythium aphanidermatum
maker-pag1_scaffold_16-fgenesh-gene-1.3
N
0.833
maker-par_contig_435-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_435-fgenesh-gene-0.0
N
0.816
maker-piw_contig_221-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_221-fgenesh-gene-0.2
N
0.769