twist3 (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000007963 T034403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.883 0.904
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.883 0.904
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.883 0.904
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.883 0.904
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.883 0.904
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.883 0.885
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.879 0.865
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.879 0.865
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.879 0.865
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.879 0.865
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.879 0.865
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.879 0.865
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.879 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000010539 bHLH 97 148

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I
SPOG_02829 Schizosaccharomyces cryophilus SPOG_02829 I
PICST_32615 Scheffersomyces stipitis PICST_32615 I
PV05_03077 Exophiala xenobiotica PV05_03077 I
VHEMI02171 Torrubiella hemipterigena VHEMI02171 I
MPH_01921 Macrophomina phaseolina MPH_01921 I
MBM_00253 Marssonina brunnea MBM_00253 I
M438DRAFT_64434 Aureobasidium pullulans M438DRAFT_64434 I
SNOG_09854 Phaeosphaeria nodorum SNOG_09854 I
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I
PV07_01234 Cladophialophora immunda PV07_01234 I
HMPREF1541_03778 Cyphellophora europaea HMPREF1541_03778 I
Z519_01437 Cladophialophora bantiana Z519_01437 I
GMDG_04293 Pseudogymnoascus destructans GMDG_04293 I
fgenesh1_pg.C_chr_6.1000096 Pichia stipitis fgenesh1_pg.C_chr_6.1000096 I
CGGC5_8784 Colletotrichum gloeosporioides CGGC5_8784 I
fgenesh1_pm.00168_#_452 Aspergillus carbonarius fgenesh1_pm.00168_#_452 I
Kwal_6732 Kluyveromyces waltii Kwal_6732 I
A1O1_00594 Capronia coronata A1O1_00594 I
SNOG_09854 Stagonospora nodorum SNOG_09854 I
PV11_05379 Exophiala sideris PV11_05379 N
SEPMUDRAFT_157964 Sphaerulina musiva SEPMUDRAFT_157964 N
Pc12g02800 Penicillium chrysogenum Pc12g02800 N
SPAPADRAFT_61965 Spathaspora passalidarum SPAPADRAFT_61965 N
TRIVIDRAFT_217692 Trichoderma virens TRIVIDRAFT_217692 N
V499_04479 Pseudogymnoascus pannorum V499_04479 N
VHEMI02369 Torrubiella hemipterigena VHEMI02369 N
Z518_07506 Rhinocladiella mackenziei Z518_07506 N
Z519_09408 Cladophialophora bantiana Z519_09408 N
CLUG_01645 Candida lusitaniae CLUG_01645 N
PAAG_02753 Paracoccidioides sp lutzii PAAG_02753 N
A1O5_08185 Cladophialophora psammophila A1O5_08185 N
BDDG_05568 Blastomyces dermatitidis BDDG_05568 N
ATEG_08244 Aspergillus terreus CADATEAG00003887 N
CLUG_01645 Clavispora lusitaniae CLUG_01645 N
DOTSEDRAFT_71818 Dothistroma septosporum DOTSEDRAFT_71818 N
HCBG_03369 Histoplasma capsulatum HCBG_03369 N
HPODL_04541 Ogataea parapolymorpha HPODL_04541 N
LELG_02863 Lodderomyces elongisporus LELG_02863 N
PV09_04421 Verruconis gallopava PV09_04421 N
PABG_03226 Paracoccidioides brasiliensis PABG_03226 N
PCH_Pc12g02800 Penicillium rubens PCH_Pc12g02800 N
PDE_06431 Penicillium oxalicum PDE_06431 N
PEX1_064660 Penicillium expansum PEX1_064660 N
PV06_08173 Exophiala oligosperma PV06_08173 N
PV07_04955 Cladophialophora immunda PV07_04955 N
PV08_05182 Exophiala spinifera PV08_05182 N