CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIF1A
(
Gallus gallus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGALG00000011870
T034513_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIF1A
M08049_2.00
Homo sapiens
NBACGTGCNN
NNGCACGTVN
ChIP-seq
Mathelier et al.(2014)
MA1106.1
0.857
0.887
HIF1A
M08713_2.00
Homo sapiens
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C
0.857
0.887
Hif1a
M08750_2.00
Mus musculus
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C
0.857
0.887
HIF1A
M09454_2.00
Homo sapiens
KACGTGMN
NKCACGTM
Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352
0.857
0.887
HIF1A
M09807_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q3
0.857
0.887
HIF1A
M09808_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q5
0.857
0.887
HIF1A
M09809_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q6
0.857
0.887
HIF1A
M09810_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q3
0.857
0.887
HIF1A
M09811_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q5
0.857
0.887
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000019338
bHLH
18
70
RKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMR
Links
Other
bHLH
family TFs
Other
Gallus gallus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF521
Homo sapiens
ENSG00000198795
D
ENSNLEG00000006568
Nomascus leucogenys
ENSNLEG00000006568
I
Gfo_R012611
Geospiza fortis
Gfo_R012611
I
ENSMMUP00000028000
Macaca fascicularis
ENSMMUP00000028000
I
ENSBTAP00000045301-D1
Bos grunniens
ENSBTAP00000045301-D1
I
Afo_R005912
Aptenodytes forsteri
Afo_R005912
I
ZNF521
Tursiops truncatus
ENSTTRG00000005318
I
ENSTSYG00000005246
Tarsius syrichta
ENSTSYG00000005246
I
ENSSTOG00000012398
Ictidomys tridecemlineatus
ENSSTOG00000012398
I
ZNF521
Sorex araneus
ENSSARG00000008323
I
Zfp521
Rattus norvegicus
ENSRNOG00000016874
I
ZNF521
Pan troglodytes
ENSPTRG00000022783
I
ENSPSIG00000002538
Pelodiscus sinensis
ENSPSIG00000002538
I
ENSPPYG00000009074
Pongo abelii
ENSPPYG00000009074
I
ZNF521
Otolemur garnettii
ENSOGAG00000007195
I
ZNF521
Oryctolagus cuniculus
ENSOCUG00000005774
I
ZNF521
Anolis carolinensis
ENSACAG00000001799
I
Zfp521
Mus musculus
ENSMUSG00000024420
I
ZNF521
Monodelphis domestica
ENSMODG00000021509
I
ZNF521
Macaca mulatta
ENSMMUG00000008600
I
ZNF521
Microcebus murinus
ENSMICG00000006267
I
ZNF521
Loxodonta africana
ENSLAFG00000013445
I
ZNF521
Gorilla gorilla
ENSGGOG00000027325
I
ENSFALG00000006065
Ficedula albicollis
ENSFALG00000006065
I
ZNF521
Erinaceus europaeus
ENSEEUG00000006860
I
ZNF521
Dasypus novemcinctus
ENSDNOG00000040834
I
ENSCSAG00000017805
Chlorocebus sabaeus
ENSCSAG00000017805
I
ZNF521
Callithrix jacchus
ENSCJAG00000020691
I
ZNF521
Bos taurus
ENSBTAG00000007383
I