CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOCUG00000029064
(
Oryctolagus cuniculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOCUG00000029064
T036076_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.395
1.000
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.395
1.000
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.395
1.000
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB
VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.395
1.000
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.395
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000026069
bHLH
1
27
IPTLPYEKRLSKVDTLRLAIGYINFLS
Links
Other
bHLH
family TFs
Other
Oryctolagus cuniculus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_01711
Coccidioides immitis
CIMG_01711
N
CFIO01_04009
Colletotrichum fioriniae
CFIO01_04009
N
CH063_13253
Colletotrichum higginsianum
CH063_13253
N
CSUB01_04913
Colletotrichum sublineola
CSUB01_04913
N