CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000014419
(
Pongo abelii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPPYG00000014419
T036884_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
1.000
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
1.000
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
1.000
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
1.000
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
1.000
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
1.000
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000016129
bHLH
35
92
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Pongo abelii
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI02G19460
Oryza meridionalis
OMERI02G19460
N
PDK_20s1433191g001
Phoenix dactylifera
PDK_20s1433191g001
N
Pavir.J05591
Panicum virgatum
Pavir.J05591
N
TRIUR3_27498
Triticum urartu
TRIUR3_27498
N
Traes_6DL_88259C187
Triticum aestivum
Traes_6DL_88259C187
N
Traes_6BL_1392D6149
Triticum aestivum
Traes_6BL_1392D6149
N
Traes_6AS_0D7F17F06
Triticum aestivum
Traes_6AS_0D7F17F06
N
Si016284m.g
Setaria italica
Si016284m.g
N
Sb04g005902
Sorghum bicolor
Sb04g005902
N
OS02G0539600
Oryza sativa
OS02G0539600
N
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
ORGLA02G0167800
Oryza glaberrima
ORGLA02G0167800
N
ONIVA03G19920
Oryza nivara
ONIVA03G19920
N
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
OLONG_005200
Oryza longistaminata
OLONG_005200
N
OGLUM02G19870
Oryza glumaepatula
OGLUM02G19870
N
OBART02G19580
Oryza barthii
OBART02G19580
N
OB02G27300
Oryza brachyantha
OB02G27300
N
MLOC_62598
Hordeum vulgare
MLOC_62598
N
LPERR02G15710
Leersia perrieri
LPERR02G15710
N
GRMZM2G326783
Zea mays
GRMZM2G326783
N
GRMZM2G134439
Zea mays
GRMZM2G134439
N
GLYMA06G17980
Glycine max
GLYMA06G17980
N
F775_27241
Aegilops tauschii
F775_27241
N
BRADI3G45230
Brachypodium distachyon
BRADI3G45230
N
BGIOSGA008381
Oryza indica
BGIOSGA008381
N