Pavir.J05591 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J05591 T289332_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05591.1.p Myb 777 836
Pavir.J05591.2.p Myb 625 684

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ab01874 Panicum virgatum Pavir.Ab01874 N 0.852
Si016284m.g Setaria italica Si016284m.g N 0.852
LPERR02G15710 Leersia perrieri LPERR02G15710 N 0.813
OPUNC02G17490 Oryza punctata OPUNC02G17490 N 0.803
OB02G27300 Oryza brachyantha OB02G27300 N 0.801
BGIOSGA008381 Oryza indica BGIOSGA008381 N 0.788
OBART02G19580 Oryza barthii OBART02G19580 N 0.788
OGLUM02G19870 Oryza glumaepatula OGLUM02G19870 N 0.788
OLONG_005200 Oryza longistaminata OLONG_005200 N 0.788
OMERI02G19460 Oryza meridionalis OMERI02G19460 N 0.788
ONIVA03G19920 Oryza nivara ONIVA03G19920 N 0.788
ORGLA02G0167800 Oryza glaberrima ORGLA02G0167800 N 0.788
ORUFI02G20630 Oryza rufipogon ORUFI02G20630 N 0.788
OS02G0539600 Oryza sativa OS02G0539600 N 0.788
Sb04g005902 Sorghum bicolor Sb04g005902 N 0.785
GRMZM2G134439 Zea mays GRMZM2G134439 N 0.750
BRADI3G45230 Brachypodium distachyon BRADI3G45230 N 0.749
GRMZM2G326783 Zea mays GRMZM2G326783 N 0.748
F775_27241 Aegilops tauschii F775_27241 N 0.735
MLOC_62598 Hordeum vulgare MLOC_62598 N 0.735
Traes_6BL_1392D6149 Triticum aestivum Traes_6BL_1392D6149 N 0.735
Traes_6DL_88259C187 Triticum aestivum Traes_6DL_88259C187 N 0.735
TRIUR3_27498 Triticum urartu TRIUR3_27498 N 0.704
GLYMA06G17980 Glycine max GLYMA06G17980 N 0.669