ATOH1 (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000009196 T037420_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00 		Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074 		0.914 1.000
Atoh1
M02820_2.00 		Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1 		0.914 1.000
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.914 1.000
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.914 1.000
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.914 1.000
Atoh1
M08779_2.00 		Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B 		0.914 1.000
Atoh1
M09480_2.00 		Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111 		0.914 1.000
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.914 1.000
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000009805 bHLH 159 211

Links

Other bHLH family TFs
Other Sus scrofa TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF7 Homo sapiens ENSG00000185507 D
ENSMPUG00000008845 Mustela putorius furo ENSMPUG00000008845 I
ENSP00000329411-D1 Bos grunniens ENSP00000329411-D1 I
IRF7 Tursiops truncatus ENSTTRG00000011148 I
ENSSTOG00000005711 Ictidomys tridecemlineatus ENSSTOG00000005711 I
IRF7 Sus scrofa ENSSSCG00000012853 I
IRF7 Pteropus vampyrus ENSPVAG00000006873 I
IRF7 Pan troglodytes ENSPTRG00000003126 I
IRF7 Procavia capensis ENSPCAG00000010286 I
ENSPANG00000007390 Papio anubis ENSPANG00000007390 I
IRF7 Otolemur garnettii ENSOGAG00000004986 I
IRF7 Oryctolagus cuniculus ENSOCUG00000002339 I
ENSOARG00000006626 Ovis aries ENSOARG00000006626 I
ENSNLEG00000008419 Nomascus leucogenys ENSNLEG00000008419 I
ENSAMEG00000010613 Ailuropoda melanoleuca ENSAMEG00000010613 I
IRF7 Macaca mulatta ENSMMUG00000004014 I
IRF7 Loxodonta africana ENSLAFG00000032120 I
IRF7 Gorilla gorilla ENSGGOG00000008341 I
IRF7 Echinops telfairi ENSETEG00000004078 I
IRF7 Equus caballus ENSECAG00000009744 I
Irf7 Dipodomys ordii ENSDORG00000014096 I
IRF7 Dasypus novemcinctus ENSDNOG00000006293 I
ENSCSAG00000010883 Chlorocebus sabaeus ENSCSAG00000010883 I
IRF7 Callithrix jacchus ENSCJAG00000012124 I
IRF7 Bos taurus ENSBTAG00000047680 I