TWIST1 (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000015370 T037437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.914 1.000
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.914 1.000
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.914 1.000
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.914 1.000
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.914 1.000
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.914 0.962
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.859 0.865
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.859 0.865
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.859 0.865
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.859 0.865
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.859 0.865
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.859 0.865
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.859 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016298 bHLH 48 99

Links

Other bHLH family TFs
Other Sus scrofa TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orf19.801 Candida albicans orf19.801 D
TBF1 Saccharomyces cerevisiae YPL128C D
ZBAI_00516 Zygosaccharomyces bailii ZBAI_00516 I
NDAI_0E02210 Naumovozyma dairenensis NDAI_0E02210 I
PAS_chr1-4_0281 Komagataella pastoris PAS_chr1-4_0281 I
PICST_47348 Scheffersomyces stipitis PICST_47348 I
SKUD_201904 Saccharomyces kudriavzevii SKUD_201904 I
SPAPADRAFT_55275 Spathaspora passalidarum SPAPADRAFT_55275 I
SU7_3534 Saccharomyces arboricola SU7_3534 I
TBLA_0B04080 Tetrapisispora blattae TBLA_0B04080 I
TPHA_0F03170 Tetrapisispora phaffii TPHA_0F03170 I
NCAS_0C01470 Naumovozyma castellii NCAS_0C01470 I
ZBAI_05815 Zygosaccharomyces bailii ZBAI_05815 I
e_gwh1.5.1.153.1 Pichia stipitis e_gwh1.5.1.153.1 I
Scas_Contig700.45 Saccharomyces castellii Scas_Contig700.45 I
21800_YPL128C Saccharomyces mikatae 21800_YPL128C I
22419_YPL128C Saccharomyces paradoxus 22419_YPL128C I
25381_YPL128C Saccharomyces bayanus 25381_YPL128C I
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I
Kwal_8619 Kluyveromyces waltii Kwal_8619 I
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I
XP_002490398.1 Pichia pastoris XP_002490398.1 I
CTRG_01572 Candida tropicalis CTRG_01572 I
CPAG_00784 Candida parapsilosis CPAG_00784 I
AACERI_AaceriACR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACR096W I
AGOS_ACR096W Ashbya gossypii AGOS_ACR096W I
BN7_5968 Wickerhamomyces ciferrii BN7_5968 I
CANTEDRAFT_127045 Candida tenuis CANTEDRAFT_127045 I
CaO19.801 Candida albicans CaO19.801 I
CaO19.8420 Candida albicans CaO19.8420 I
CD36_18830 Candida dubliniensis CD36_18830 I
CLUG_01092 Clavispora lusitaniae CLUG_01092 I
CORT_0A10400 Candida orthopsilosis CORT_0A10400 I
CLUG_01092 Candida lusitaniae CLUG_01092 I
DEHA2C16346g Debaryomyces hansenii DEHA2C16346g I
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I
G210_0538 Candida maltosa G210_0538 I
GNLVRS01_PISO0K21658g Millerozyma farinosa GNLVRS01_PISO0K21658g I
GNLVRS01_PISO0L21659g Millerozyma farinosa GNLVRS01_PISO0L21659g I
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I
Kpol_1072p42 Vanderwaltozyma polyspora Kpol_1072p42 I
Kpol_530p11 Vanderwaltozyma polyspora Kpol_530p11 I
LELG_01028 Lodderomyces elongisporus LELG_01028 I