CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HES4
(
Taeniopygia guttata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTGUG00000009134
T037654_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
0.964
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
0.964
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
0.964
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
0.964
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
0.964
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
0.964
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
0.964
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000009410
bHLH
35
92
RKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRSLQ
Links
Other
bHLH
family TFs
Other
Taeniopygia guttata
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J16113
Panicum virgatum
Pavir.J16113
I
OMERI05G16220
Oryza meridionalis
OMERI05G16220
N
Pavir.Ea03421
Panicum virgatum
Pavir.Ea03421
N
Si002423m.g
Setaria italica
Si002423m.g
N
OS05G0449900
Oryza sativa
OS05G0449900
N
ORUFI05G19800
Oryza rufipogon
ORUFI05G19800
N
ORGLA05G0161500
Oryza glaberrima
ORGLA05G0161500
N
OPUNC05G16320
Oryza punctata
OPUNC05G16320
N
OPUNC01G36480
Oryza punctata
OPUNC01G36480
N
ONIVA05G19570
Oryza nivara
ONIVA05G19570
N
BGIOSGA017944
Oryza indica
BGIOSGA017944
N
OGLUM05G19710
Oryza glumaepatula
OGLUM05G19710
N
OB05G26340
Oryza brachyantha
OB05G26340
N
OB01G46330
Oryza brachyantha
OB01G46330
N
MLOC_70659
Hordeum vulgare
MLOC_70659
N
LPERR05G14660
Leersia perrieri
LPERR05G14660
N
LPERR01G32290
Leersia perrieri
LPERR01G32290
N
GRMZM2G125522
Zea mays
GRMZM2G125522
N
GRMZM2G056986
Zea mays
GRMZM2G056986
N