Pavir.Ea03421 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea03421 T289141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03421.1.p Myb 38 86
Pavir.Ea03421.1.p Myb 143 190

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J16113 Panicum virgatum Pavir.J16113 I 0.855
Si002423m.g Setaria italica Si002423m.g N 0.828
GRMZM2G125522 Zea mays GRMZM2G125522 N 0.757
GRMZM2G056986 Zea mays GRMZM2G056986 N 0.751
OPUNC01G36480 Oryza punctata OPUNC01G36480 N 0.745
LPERR01G32290 Leersia perrieri LPERR01G32290 N 0.741
OB01G46330 Oryza brachyantha OB01G46330 N 0.741
Sb03g040160 Sorghum bicolor Sb03g040160 N 0.739
LPERR05G14660 Leersia perrieri LPERR05G14660 N 0.708
MLOC_70659 Hordeum vulgare MLOC_70659 N 0.706
Si022816m.g Setaria italica Si022816m.g N 0.705
BRADI2G23710 Brachypodium distachyon BRADI2G23710 N 0.704
Pavir.J04337 Panicum virgatum Pavir.J04337 N 0.702
BGIOSGA000472 Oryza indica BGIOSGA000472 N 0.700
OBART01G37590 Oryza barthii OBART01G37590 N 0.700
OBART01G37610 Oryza barthii OBART01G37610 N 0.700
OGLUM01G41520 Oryza glumaepatula OGLUM01G41520 N 0.700
OLONG_007151 Oryza longistaminata OLONG_007151 N 0.700
OMERI01G34580 Oryza meridionalis OMERI01G34580 N 0.700
ONIVA01G42500 Oryza nivara ONIVA01G42500 N 0.700
ORGLA01G0314400 Oryza glaberrima ORGLA01G0314400 N 0.700
ORUFI01G40950 Oryza rufipogon ORUFI01G40950 N 0.700
BGIOSGA017944 Oryza indica BGIOSGA017944 N 0.699
OGLUM05G19710 Oryza glumaepatula OGLUM05G19710 N 0.699
OMERI05G16220 Oryza meridionalis OMERI05G16220 N 0.699
ONIVA05G19570 Oryza nivara ONIVA05G19570 N 0.699
OPUNC05G16320 Oryza punctata OPUNC05G16320 N 0.699
ORGLA05G0161500 Oryza glaberrima ORGLA05G0161500 N 0.699
ORUFI05G19800 Oryza rufipogon ORUFI05G19800 N 0.699
OS05G0449900 Oryza sativa OS05G0449900 N 0.699
OB05G26340 Oryza brachyantha OB05G26340 N 0.689
GLYMA18G07250 Glycine max GLYMA18G07250 I 0.686
OS01G0853700 Oryza sativa OS01G0853700 N 0.679
F775_29279 Aegilops tauschii F775_29279 N 0.676
TRAES3BF018800030CFD_g Triticum aestivum TRAES3BF018800030CFD_g N 0.676
Sb09g022060 Sorghum bicolor Sb09g022060 N 0.675