tfec (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000018518 T037802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFEC
M02778_2.00 		Homo sapiens
RNCACRTGAB
VTCAYGTGNY		 SELEX
Jolma et al.(2013)
TFEC_1 		0.914 0.981
TFEC
M04078_2.00 		Homo sapiens
NVCACGTGACN
NGTCACGTGBN		 SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX 		0.914 0.981
TFEC
M04079_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX 		0.914 0.981
Tfec
M00755_2.00 		Mus musculus
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2013)
pTH2885 		0.914 0.963
Tfec
M01736_2.00 		Mus musculus
NCNCRTGVYN
NRBCAYGNGN		 PBM
Weirauch et al.(2014)
pTH5065 		0.914 0.963
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.870 0.926
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.870 0.926
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.870 0.926
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.870 0.926
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.870 0.926
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.870 0.926
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.870 0.926
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.870 0.907
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.870 0.907
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.870 0.907
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.870 0.907
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000021692 bHLH 167 220

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CXXC5 Homo sapiens ENSG00000171604 D 0.000
ENSPFOG00000012083 Poecilia formosa ENSPFOG00000012083 I 0.000
ENSSHAG00000012293 Sarcophilus harrisii ENSSHAG00000012293 I 0.000
CXXC5 Sorex araneus ENSSARG00000013369 I 0.000
Cxxc5 Rattus norvegicus ENSRNOG00000032878 I 0.000
Tet3 Rattus norvegicus ENSRNOG00000011387 I 0.000
Cxxc5 Rattus norvegicus ENSRNOG00000003734 I 0.000
CXXC5 Pan troglodytes ENSPTRG00000017304 I 0.000
ENSPSIG00000013782 Pelodiscus sinensis ENSPSIG00000013782 I 0.000
ENSPPYG00000015845 Pongo abelii ENSPPYG00000015845 I 0.000
ENSPPYG00000012286 Pongo abelii ENSPPYG00000012286 I 0.000
ENSPFOG00000018974 Poecilia formosa ENSPFOG00000018974 I 0.000
ENSSSCG00000014357 Sus scrofa ENSSSCG00000014357 I 0.000
ENSPFOG00000012064 Poecilia formosa ENSPFOG00000012064 I 0.000
CXXC5 Procavia capensis ENSPCAG00000001216 I 0.000
ENSPANG00000024069 Papio anubis ENSPANG00000024069 I 0.000
ENSPANG00000011930 Papio anubis ENSPANG00000011930 I 0.000
ENSORLG00000006474 Oryzias latipes ENSORLG00000006474 I 0.000
cxxc5a Oryzias latipes ENSORLG00000006108 I 0.000
CXXC5 Ochotona princeps ENSOPRG00000003163 I 0.000
ENSONIG00000017539 Oreochromis niloticus ENSONIG00000017539 I 0.000
ENSONIG00000005000 Oreochromis niloticus ENSONIG00000005000 I 0.000
CXXC5 Otolemur garnettii ENSOGAG00000024233 I 0.000
TET3 Oryctolagus cuniculus ENSOCUG00000016640 I 0.000
Aan_R008171 Calypte anna Aan_R008171 I 0.000
Sakowv30045758m.g Saccoglossus kowalevskii Sakowv30045758m.g I 0.000
Pvit_12827 Pogona vitticeps Pvit_12827 I 0.000
Ogr13317 Ophisaurus gracilis Ogr13317 I 0.000
Myotis_brandtii_CXXC5_10027816 Myotis brandtii Myotis_brandtii_CXXC5_10027816 I 0.000
Gfo_R011184 Geospiza fortis Gfo_R011184 I 0.000
ENSP00000302543 Macaca fascicularis ENSP00000302543 I 0.000
ENSBTAP00000005204-D1 Bos grunniens ENSBTAP00000005204-D1 I 0.000
Cmyd_10008669 Chelonia mydas Cmyd_10008669 I 0.000
Brh_R010009 Buceros rhinoceros Brh_R010009 I 0.000
Alligator_sinensis_CCG005573.1 Alligator sinensis Alligator_sinensis_CCG005573.1 I 0.000
Afo_R004362 Aptenodytes forsteri Afo_R004362 I 0.000
TET3 Sus scrofa ENSSSCG00000008292 I 0.000
ENSXMAG00000011127 Xiphophorus maculatus ENSXMAG00000011127 I 0.000
ENSXMAG00000005442 Xiphophorus maculatus ENSXMAG00000005442 I 0.000
CXXC5 Tursiops truncatus ENSTTRG00000003771 I 0.000
cxxc5a Takifugu rubripes ENSTRUG00000017014 I 0.000
cxxc4 Takifugu rubripes ENSTRUG00000004403 I 0.000
ENSTNIG00000018036 Tetraodon nigroviridis ENSTNIG00000018036 I 0.000
CXXC5 Taeniopygia guttata ENSTGUG00000001608 I 0.000
CXXC5 Tupaia belangeri ENSTBEG00000006970 I 0.000
ENSSTOG00000025994 Ictidomys tridecemlineatus ENSSTOG00000025994 I 0.000
ENSOARG00000012255 Ovis aries ENSOARG00000012255 I 0.000
ENSCSAG00000015514 Chlorocebus sabaeus ENSCSAG00000015514 I 0.000
CXXC5 Anolis carolinensis ENSACAG00000002186 I 0.000
TET3 Homo sapiens ENSG00000187605 I 0.000
CXXC5 Felis catus ENSFCAG00000010527 I 0.000
ENSFALG00000009467 Ficedula albicollis ENSFALG00000009467 I 0.000
CXXC5 Erinaceus europaeus ENSEEUG00000008125 I 0.000
CXXC5 Equus caballus ENSECAG00000016958 I 0.000
TET3 Dasypus novemcinctus ENSDNOG00000047130 I 0.000
CXXC5 Dasypus novemcinctus ENSDNOG00000008161 I 0.000
cxxc5a Danio rerio ENSDARG00000078865 I 0.000
cxxc4 Danio rerio ENSDARG00000077817 I 0.000
cxxc5b Danio rerio ENSDARG00000075735 I 0.000
ENSGACG00000017555 Gasterosteus aculeatus ENSGACG00000017555 I 0.000
ENSCSAG00000013001 Chlorocebus sabaeus ENSCSAG00000013001 I 0.000
CXXC5 Cavia porcellus ENSCPOG00000001156 I 0.000
TET3 Canis familiaris ENSCAFG00000008728 I 0.000
CXXC5 Canis familiaris ENSCAFG00000005714 I 0.000
CXXC5 Bos taurus ENSBTAG00000003986 I 0.000
ENSAPLG00000014751 Anas platyrhynchos ENSAPLG00000014751 I 0.000
ENSAMXG00000025596 Astyanax mexicanus ENSAMXG00000025596 I 0.000
ENSAMXG00000018855 Astyanax mexicanus ENSAMXG00000018855 I 0.000
ENSAMXG00000005579 Astyanax mexicanus ENSAMXG00000005579 I 0.000
ENSAMEG00000011210 Ailuropoda melanoleuca ENSAMEG00000011210 I 0.000
CXXC5 Microcebus murinus ENSMICG00000002899 I 0.000
ENSOANG00000009530 Ornithorhynchus anatinus ENSOANG00000009530 I 0.000
ENSNLEG00000009189 Nomascus leucogenys ENSNLEG00000009189 I 0.000
ENSNLEG00000000317 Nomascus leucogenys ENSNLEG00000000317 I 0.000
Cxxc5 Mus musculus ENSMUSG00000046668 I 0.000
Tet3 Mus musculus ENSMUSG00000034832 I 0.000
ENSMPUG00000009101 Mustela putorius furo ENSMPUG00000009101 I 0.000
ENSMPUG00000007806 Mustela putorius furo ENSMPUG00000007806 I 0.000
CXXC5 Monodelphis domestica ENSMODG00000011772 I 0.000
CXXC5 Macaca mulatta ENSMMUG00000001941 I 0.000
CXXC5 Myotis lucifugus ENSMLUG00000003056 I 0.000
cxxc5a Gasterosteus aculeatus ENSGACG00000020657 I 0.000
CXXC5 Meleagris gallopavo ENSMGAG00000003042 I 0.000
ENSMEUG00000015364 Macropus eugenii ENSMEUG00000015364 I 0.000
ENSLOCG00000012610 Lepisosteus oculatus ENSLOCG00000012610 I 0.000
ENSLOCG00000012594 Lepisosteus oculatus ENSLOCG00000012594 I 0.000
CXXC5 Loxodonta africana ENSLAFG00000011784 I 0.000
ENSLACG00000011147 Latimeria chalumnae ENSLACG00000011147 I 0.000
ENSLACG00000003110 Latimeria chalumnae ENSLACG00000003110 I 0.000
ENSGMOG00000019812 Gadus morhua ENSGMOG00000019812 I 0.000
ENSGMOG00000019280 Gadus morhua ENSGMOG00000019280 I 0.000
CXXC5 Gorilla gorilla ENSGGOG00000014181 I 0.000
CXXC5 Gallus gallus ENSGALG00000000884 I 0.000
Cmyd_10006569 Chelonia mydas Cmyd_10006569 N 0.000
Ogr01870 Ophisaurus gracilis Ogr01870 N 0.000