GA18959 (Drosophila pseudoobscura)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 FBgn0078958 T038482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.914 1.000
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.914 1.000
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.914 1.000
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.914 1.000
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.890 0.963
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.890 0.963
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.890 0.963
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.890 0.963
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.890 0.926
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.890 0.926
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.890 0.926
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.890 0.926
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.890 0.926
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0278830 bHLH 133 186

Links

Other bHLH family TFs
Other Drosophila pseudoobscura TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
REL Homo sapiens ENSG00000162924 D
Rel Mus musculus ENSMUSG00000020275 D
REL Pteropus vampyrus ENSPVAG00000000364 I
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I
REL Taeniopygia guttata ENSTGUG00000006743 I
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I
REL Sus scrofa ENSSSCG00000008388 I
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I
REL Sorex araneus ENSSARG00000011809 I
Rel Rattus norvegicus ENSRNOG00000054437 I
REL Vicugna pacos ENSVPAG00000000493 I
REL Pan troglodytes ENSPTRG00000011949 I
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I
rel Oryzias latipes ENSORLG00000001586 I
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I
REL Otolemur garnettii ENSOGAG00000013722 I
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I
Aan_R006375 Calypte anna Aan_R006375 I
Afo_R011359 Aptenodytes forsteri Afo_R011359 I
Brh_R000963 Buceros rhinoceros Brh_R000963 I
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I
Gfo_R008165 Geospiza fortis Gfo_R008165 I
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I
Pvit_04537 Pogona vitticeps Pvit_04537 I
Tal_R011178 Tyto alba Tal_R011178 I
rel.S Xenopus laevis XB-GENE-17342653 I
rel Xenopus tropicalis XB-GENE-993262 I
rel.L Xenopus laevis XB-GENE-993266 I
REL Gallus gallus ENSGALG00000007845 I
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I
REL Bos taurus ENSBTAG00000015386 I
REL Canis familiaris ENSCAFG00000002981 I
REL Choloepus hoffmanni ENSCHOG00000010935 I
REL Callithrix jacchus ENSCJAG00000008975 I
REL Cavia porcellus ENSCPOG00000011659 I
ENSCSAG00000014415 Chlorocebus sabaeus ENSCSAG00000014415 I
rel Danio rerio ENSDARG00000055276 I
REL Equus caballus ENSECAG00000003277 I
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I
REL Felis catus ENSFCAG00000008018 I
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I
REL Gorilla gorilla ENSGGOG00000024826 I
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I
REL Loxodonta africana ENSLAFG00000013507 I
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I
REL Meleagris gallopavo ENSMGAG00000001721 I
REL Microcebus murinus ENSMICG00000010062 I
REL Myotis lucifugus ENSMLUG00000007454 I
REL Monodelphis domestica ENSMODG00000002172 I
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I
REL Ornithorhynchus anatinus ENSOANG00000012405 I
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I
REL Oryctolagus cuniculus ENSOCUG00000004968 I
REL Anolis carolinensis ENSACAG00000003030 I