CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Microcebus murinus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSMICG00000010062
T317265_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.967
0.967
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.967
0.967
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.967
0.967
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.967
0.967
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.918
0.918
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000009165
Rel
10
141
IEITEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNSRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFVQERRPLFFQNLGIRCVKKKEVKEAIISRIKAGINPFNXXXXXXXXXX
Links
Other
Rel
family TFs
Other
Microcebus murinus
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018236
Ailuropoda melanoleuca
ENSAMEG00000018236
I
0.967
REL
Canis familiaris
ENSCAFG00000002981
I
0.967
REL
Callithrix jacchus
ENSCJAG00000008975
I
0.967
REL
Felis catus
ENSFCAG00000008018
I
0.967
REL
Otolemur garnettii
ENSOGAG00000013722
I
0.967
REL
Gorilla gorilla
ENSGGOG00000024826
I
0.959
ENSOARG00000001457
Ovis aries
ENSOARG00000001457
I
0.951
REL
Equus caballus
ENSECAG00000003277
I
0.943
Rel
Rattus norvegicus
ENSRNOG00000054437
I
0.934
REL
Sorex araneus
ENSSARG00000011809
I
0.934
Rel
Mus musculus
ENSMUSG00000020275
D
0.918
REL
Monodelphis domestica
ENSMODG00000002172
I
0.910
REL
Pteropus vampyrus
ENSPVAG00000000364
I
0.893
REL
Sus scrofa
ENSSSCG00000008388
I
0.861
Brh_R000963
Buceros rhinoceros
Brh_R000963
I
0.820
REL
Gallus gallus
ENSGALG00000007845
I
0.811
REL
Meleagris gallopavo
ENSMGAG00000001721
I
0.811
ENSFALG00000011066
Ficedula albicollis
ENSFALG00000011066
I
0.803
ENSAPLG00000006795
Anas platyrhynchos
ENSAPLG00000006795
I
0.795
REL
Taeniopygia guttata
ENSTGUG00000006743
I
0.795
Pvit_04537
Pogona vitticeps
Pvit_04537
I
0.787
ENSPSIG00000013860
Pelodiscus sinensis
ENSPSIG00000013860
I
0.770
ENSGMOG00000018800
Gadus morhua
ENSGMOG00000018800
I
0.754
Cmyd_10008594
Chelonia mydas
Cmyd_10008594
I
0.754
ENSPFOG00000013038
Poecilia formosa
ENSPFOG00000013038
I
0.746
ENSXMAG00000007379
Xiphophorus maculatus
ENSXMAG00000007379
I
0.746
Tal_R011178
Tyto alba
Tal_R011178
I
0.740
ENSAMXG00000004647
Astyanax mexicanus
ENSAMXG00000004647
I
0.738
rel
Oryzias latipes
ENSORLG00000001586
I
0.738
REL
Choloepus hoffmanni
ENSCHOG00000010935
I
0.727
RELA
Homo sapiens
ENSG00000173039
D
0.727
Tal_R005550
Tyto alba
Tal_R005550
I
0.721
RELB
Tupaia belangeri
ENSTBEG00000001763
I
0.714
ENSTNIG00000017107
Tetraodon nigroviridis
ENSTNIG00000017107
N
0.713
REL
Macaca mulatta
ENSMMUG00000010834
I
0.704
ENSPANG00000006148
Papio anubis
ENSPANG00000006148
I
0.704
ENSTSYG00000012918
Tarsius syrichta
ENSTSYG00000012918
I
0.704
ENSMMUP00000014199
Macaca fascicularis
ENSMMUP00000014199
I
0.704