CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GI23534
(
Drosophila mojavensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0146260
T038730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.914
0.981
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.890
0.865
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.890
0.865
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.890
0.865
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.890
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0172751
bHLH
78
130
QRRAANIRERRRMFNLNEAFDKLRPKVPTFAYEKRLSRIETLRLAITYIGFMA
Links
Other
bHLH
family TFs
Other
Drosophila mojavensis
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si002586m.g
Setaria italica
Si002586m.g
N
Cla018691
Citrullus lanatus
Cla018691
N
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
Traes_5DL_43FC1B296
Triticum aestivum
Traes_5DL_43FC1B296
N
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
Traes_1AL_C76BCC7EC
Triticum aestivum
Traes_1AL_C76BCC7EC
N
Traes_1AL_179FC28F2
Triticum aestivum
Traes_1AL_179FC28F2
N
TCM_041364
Theobroma cacao
TCM_041364
N
Si022966m.g
Setaria italica
Si022966m.g
N
30055.m001588
Ricinus communis
30055.m001588
N
Sb03g040720
Sorghum bicolor
Sb03g040720
N
OS12G0156100
Oryza sativa
OS12G0156100
N
OS01G0862800
Oryza sativa
OS01G0862800
N
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
Pavir.J36282
Panicum virgatum
Pavir.J36282
N
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
OPUNC05G16010
Oryza punctata
OPUNC05G16010
N
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
GRMZM5G832473
Zea mays
GRMZM5G832473
N
GRMZM2G465835
Zea mays
GRMZM2G465835
N
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
F775_19761
Aegilops tauschii
F775_19761
N
F775_13455
Aegilops tauschii
F775_13455
N
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
Bra020188
Brassica rapa
Bra020188
N
Bra002408
Brassica rapa
Bra002408
N
Bo9g148540
Brassica oleracea
Bo9g148540
N
Bo3g016870
Brassica oleracea
Bo3g016870
N
Bo2g023870
Brassica oleracea
Bo2g023870
N
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
NAC090
Arabidopsis thaliana
AT5G22380
N
LPERR05G14390
Leersia perrieri
LPERR05G14390
N
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
MLOC_60153
Hordeum vulgare
MLOC_60153
N
MLOC_7757
Hordeum vulgare
MLOC_7757
N
OB05G26010
Oryza brachyantha
OB05G26010
N
OB12G13350
Oryza brachyantha
OB12G13350
N
OBART01G38190
Oryza barthii
OBART01G38190
N
OBART12G03440
Oryza barthii
OBART12G03440
N
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N