DYT1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh1_pg.C_scaffold_7001824 T039087_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.894 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_7001824 bHLH 30 78

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G44430 Arabidopsis thaliana AT2G44430 N
Bostr.25993s0339 Boechera stricta Bostr.25993s0339 N
Cagra.4268s0005 Capsella grandiflora Cagra.4268s0005 N
Carubv10024727m.g Capsella rubella Carubv10024727m.g N
Thhalv10001779m.g Eutrema salsugineum Thhalv10001779m.g N