GRMZM2G062541 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G062541 T039848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05451.1
M01120_2.00 		Cannabis sativa
YCACGTGM
KCACGTGR		 PBM
Lambert et al.(2019)
pTH10100 		0.856 0.959
PIF3
M00854_2.00 		Arabidopsis thaliana
CACGTGSNN
NNSCACGTG		 PBM
Franco-Zorrilla et al.(2014)
PIF3 		0.856 0.939
PIF3
M00722_2.00 		Arabidopsis thaliana
NCACRTN
NAYGTGN		 PBM
Chang et al.(2013)
pTH8200 		0.856 0.939
PIF3
M08045_2.00 		Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD		 ChIP-seq
Mathelier et al.(2014)
MA0560.1 		0.856 0.939
PIF3
M09780_2.00 		Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV		 Transfac
Matys et al.(2006)
P$PIF3_01 		0.856 0.939
PIF3
M09781_2.00 		Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH		 Transfac
Matys et al.(2006)
P$PIF3_02 		0.856 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G062541_P01 bHLH 324 372

Links

Other bHLH family TFs
Other Zea mays TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.000
29685.m000503 Ricinus communis 29685.m000503 N 0.000
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.000
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.000
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.000
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.000
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.000
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.000
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.000
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.000
Pm003854 Prunus mume Pm003854 N 0.000
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.000
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.000
MDP0000234814 Malus domestica MDP0000234814 N 0.000
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.000
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.000
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.000
PK06148.1 Cannabis sativa PK06148.1 N 0.000
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.000
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.000
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.000
Bo5g010680 Brassica oleracea Bo5g010680 N 0.000
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.000
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.000
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.000
OB04G20960 Oryza brachyantha OB04G20960 N 0.000
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.000
OS04G0443000 Oryza sativa OS04G0443000 N 0.000
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.000
FRS11 Arabidopsis thaliana AT1G10240 N 0.000
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.000
Si012297m.g Setaria italica Si012297m.g N 0.000
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.000
TCM_041141 Theobroma cacao TCM_041141 N 0.000
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.000
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.000
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.000
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.000