GRMZM2G062541 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G062541 T039848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05451.1
M01120_2.00 		Cannabis sativa
YCACGTGM
KCACGTGR		 PBM
Lambert et al.(2019)
pTH10100 		0.856 0.959
PIF3
M00854_2.00 		Arabidopsis thaliana
CACGTGSNN
NNSCACGTG		 PBM
Franco-Zorrilla et al.(2014)
PIF3 		0.856 0.939
PIF3
M00722_2.00 		Arabidopsis thaliana
NCACRTN
NAYGTGN		 PBM
Chang et al.(2013)
pTH8200 		0.856 0.939
PIF3
M08045_2.00 		Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD		 ChIP-seq
Mathelier et al.(2014)
MA0560.1 		0.856 0.939
PIF3
M09780_2.00 		Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV		 Transfac
Matys et al.(2006)
P$PIF3_01 		0.856 0.939
PIF3
M09781_2.00 		Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH		 Transfac
Matys et al.(2006)
P$PIF3_02 		0.856 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G062541_P01 bHLH 324 372

Links

Other bHLH family TFs
Other Zea mays TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00045p00141060 Amborella trichopoda AMTR_s00045p00141060 I 0.856
PIF3 Arabidopsis thaliana AT1G09530 D 0.856
Bo5g009910 Brassica oleracea Bo5g009910 I 0.856
Bo8g111120 Brassica oleracea Bo8g111120 I 0.856
Bra020017 Brassica rapa Bra020017 I 0.856
Bra031668 Brassica rapa Bra031668 I 0.856
PIF3 Arabidopsis lyrata fgenesh2_kg.1__1002__AT1G09530.2 I 0.856
GLYMA10G28290 Glycine max GLYMA10G28290 I 0.856
GLYMA20G22291 Glycine max GLYMA20G22291 I 0.856
GSMUA_Achr5G18390_001 Musa acuminata GSMUA_Achr5G18390_001 I 0.856
MTR_1g084980 Medicago truncatula MTR_1g084980 I 0.856
POPTR_0005s00360 Populus trichocarpa POPTR_0005s00360 I 0.856
POPTR_0013s00310 Populus trichocarpa POPTR_0013s00310 I 0.856
PRUPE_ppa001899mg Prunus persica PRUPE_ppa001899mg I 0.856
TCM_026851 Theobroma cacao TCM_026851 I 0.856
PIF3 Vitis vinifera VIT_14s0060g00260 I 0.856
Ca_03591 Cicer arietinum Ca_03591 I 0.856
Cla020302 Citrullus lanatus Cla020302 I 0.856
Pm003265 Prunus mume Pm003265 I 0.856
30128.m008988 Ricinus communis 30128.m008988 I 0.856
cassava12867.valid.m1 Manihot esculenta cassava12867.valid.m1 I 0.856
cassava17680.valid.m1 Manihot esculenta cassava17680.valid.m1 I 0.856
cassava17681.valid.m1 Manihot esculenta cassava17681.valid.m1 I 0.856
Cucsa.090320 Cucumis sativus Cucsa.090320 I 0.856
mgf017958m Mimulus guttatus mgf017958m I 0.856
Aquca_003_00259 Aquilegia coerulea Aquca_003_00259 I 0.856
Bostr.25494s0011 Boechera stricta Bostr.25494s0011 I 0.856
Cagra.4395s0138 Capsella grandiflora Cagra.4395s0138 I 0.856
Carubv10008815m.g Capsella rubella Carubv10008815m.g I 0.856
Ciclev10027890m.g Citrus clementina Ciclev10027890m.g I 0.856
Eucgr.B01825 Eucalyptus grandis Eucgr.B01825 I 0.856
gene22963-v1.0-hybrid Fragaria vesca gene22963-v1.0-hybrid I 0.856
Gorai.007G309400 Gossypium raimondii Gorai.007G309400 I 0.856
MDP0000290263 Malus domestica MDP0000290263 I 0.856
orange1.1g006040m.g Citrus sinensis orange1.1g006040m.g I 0.856
SapurV1A.0442s0220 Salix purpurea SapurV1A.0442s0220 I 0.856
Thhalv10007343m.g Eutrema salsugineum Thhalv10007343m.g I 0.856
PK05451.1 Cannabis sativa PK05451.1 D 0.856
chr5.CM0048.80.nd Lotus japonicus chr5.CM0048.80.nd I 0.856
PDK_20s1486002g002 Phoenix dactylifera PDK_20s1486002g002 I 0.856
BGIOSGA001870 Oryza indica BGIOSGA001870 I 0.843
BGIOSGA019157 Oryza indica BGIOSGA019157 I 0.843
BRADI2G11100 Brachypodium distachyon BRADI2G11100 I 0.843
GLYMA02G45150 Glycine max GLYMA02G45150 I 0.843
GLYMA03G38675 Glycine max GLYMA03G38675 I 0.843
GLYMA14G03600 Glycine max GLYMA14G03600 I 0.843
GLYMA19G41261 Glycine max GLYMA19G41261 I 0.843
GRMZM2G115960 Zea mays GRMZM2G115960 I 0.843
GRMZM2G387528 Zea mays GRMZM2G387528 I 0.843
LPERR01G10950 Leersia perrieri LPERR01G10950 I 0.843
LPERR05G02370 Leersia perrieri LPERR05G02370 I 0.843
MLOC_68598 Hordeum vulgare MLOC_68598 I 0.843
OB01G21830 Oryza brachyantha OB01G21830 I 0.843
OB05G12600 Oryza brachyantha OB05G12600 I 0.843
OBART01G11950 Oryza barthii OBART01G11950 I 0.843
OGLUM01G13370 Oryza glumaepatula OGLUM01G13370 I 0.843
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I 0.843
OMERI05G02570 Oryza meridionalis OMERI05G02570 I 0.843
ONIVA01G14150 Oryza nivara ONIVA01G14150 I 0.843
ONIVA05G02540 Oryza nivara ONIVA05G02540 I 0.843
OPUNC01G11630 Oryza punctata OPUNC01G11630 I 0.843
OPUNC05G02500 Oryza punctata OPUNC05G02500 I 0.843
ORGLA08G0194500 Oryza glaberrima ORGLA08G0194500 I 0.843
ORUFI05G02750 Oryza rufipogon ORUFI05G02750 I 0.843
OS01G0286100 Oryza sativa OS01G0286100 I 0.843
APG Oryza sativa OS05G0139100 I 0.843
PGSC0003DMG400018280 Solanum tuberosum PGSC0003DMG400018280 I 0.843
Sb09g003090 Sorghum bicolor Sb09g003090 I 0.843
SELMODRAFT_114141 Selaginella moellendorffii SELMODRAFT_114141 I 0.843
SELMODRAFT_116654 Selaginella moellendorffii SELMODRAFT_116654 I 0.843
SELMODRAFT_118904 Selaginella moellendorffii SELMODRAFT_118904 I 0.843
Si000698m.g Setaria italica Si000698m.g I 0.843
Si021472m.g Setaria italica Si021472m.g I 0.843
Solyc01g102300.2 Solanum lycopersicum Solyc01g102300.2 I 0.843
Traes_1BS_D1FCBFBE8 Triticum aestivum Traes_1BS_D1FCBFBE8 I 0.843
Traes_1DS_55E91A134 Triticum aestivum Traes_1DS_55E91A134 I 0.843
e_gw1.84.236.1 Physcomitrella patens e_gw1.84.236.1 I 0.843
estExt_fgenesh1_pg.C_680048 Physcomitrella patens estExt_fgenesh1_pg.C_680048 I 0.843
estExt_fgenesh1_pg.C_690022 Physcomitrella patens estExt_fgenesh1_pg.C_690022 I 0.843
gw1.147.92.1 Physcomitrella patens gw1.147.92.1 I 0.843
mgf009653m Mimulus guttatus mgf009653m I 0.843
Lus10020727.g Linum usitatissimum Lus10020727.g I 0.843
Lus10029805.g Linum usitatissimum Lus10029805.g I 0.843
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I 0.843
Pavir.Ea01048 Panicum virgatum Pavir.Ea01048 I 0.843
PDK_20s1306831g002 Phoenix dactylifera PDK_20s1306831g002 I 0.843
PDK_20s1775531g001 Phoenix dactylifera PDK_20s1775531g001 I 0.843
Cla018863 Citrullus lanatus Cla018863 I 0.841
Cucsa.113040 Cucumis sativus Cucsa.113040 I 0.841
Bra000283 Brassica rapa Bra000283 I 0.840
MTR_7g111320 Medicago truncatula MTR_7g111320 I 0.840
SELMODRAFT_29179 Selaginella moellendorffii SELMODRAFT_29179 I 0.840
SELMODRAFT_39143 Selaginella moellendorffii SELMODRAFT_39143 I 0.840
AMTR_s00110p00030150 Amborella trichopoda AMTR_s00110p00030150 I 0.838