SINV12414 (Solenopsis invicta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 SINV12414 T044837_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.840 0.865
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.840 0.865
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.840 0.865
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.840 0.865
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.840 0.865
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.840 0.865
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.840 0.846
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.840 0.846
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.840 0.846
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.840 0.846
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.840 0.846
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.840 0.846
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.840 0.846
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.840 0.846
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.840 0.846
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.840 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV12414-PA bHLH 31 83

Links

Other bHLH family TFs
Other Solenopsis invicta TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPBE_0002474001 Heligmosomoides bakeri HPBE_0002474001 I 0.000
TELCIR_11314 Teladorsagia circumcincta TELCIR_11314 I 0.000
TELCIR_07248 Teladorsagia circumcincta TELCIR_07248 I 0.000
SVUK_0000451101 Strongylus vulgaris SVUK_0000451101 I 0.000
scaffold60-EXSNAP2012.12 Pristionchus exspectatus scaffold60-EXSNAP2012.12 I 0.000
NECAME_04511 Necator americanus NECAME_04511 I 0.000
NBR_0000299801 Nippostrongylus brasiliensis NBR_0000299801 I 0.000
NBR_0000263101 Nippostrongylus brasiliensis NBR_0000263101 I 0.000
HPLM_0001857601 Haemonchus placei HPLM_0001857601 I 0.000
PPA14541 Pristionchus pacificus PPA14541 I 0.000
HCOI01121900 Haemonchus contortus HCOI01121900 I 0.000
DICVIV_02775 Dictyocaulus viviparus DICVIV_02775 I 0.000
CGOC_0000858101 Cylicostephanus goldi CGOC_0000858101 I 0.000
ANCCEY_00577 Ancylostoma ceylanicum ANCCEY_00577 I 0.000
ANCCAN_04319 Ancylostoma caninum ANCCAN_04319 I 0.000
ACOC_0000846801 Angiostrongylus costaricensis ACOC_0000846801 I 0.000
ACAC_0001093601 Angiostrongylus cantonensis ACAC_0001093601 I 0.000