CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TC001473
(
Tribolium castaneum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TC001473
T045278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.890
0.962
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.890
0.904
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.890
0.904
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.890
0.904
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.890
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC001473-PA
bHLH
98
150
QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYISFMS
Links
Other
bHLH
family TFs
Other
Tribolium castaneum
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.000
emb2746
Arabidopsis thaliana
AT5G63420
N
0.000
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.000
Bra038629
Brassica rapa
Bra038629
N
0.000
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.000
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.000
mgf010338m
Mimulus guttatus
mgf010338m
N
0.000
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.000
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.000
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.000
SapurV1A.0168s0020
Salix purpurea
SapurV1A.0168s0020
N
0.000
SapurV1A.0841s0060
Salix purpurea
SapurV1A.0841s0060
N
0.000
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.000