CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0168s0020
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0168s0020
T289629_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0168s0020.1.p
Myb
796
855
RTKWKPEEVKSLIKLRGELHSRFQVVRGRMALWEEISTNLMADGINRSPGQCKYLWTSLA
SapurV1A.0168s0020.2.p
Myb
697
756
RTKWKPEEVKSLIKLRGELHSRFQVVRGRMALWEEISTNLMADGINRSPGQCKYLWTSLA
SapurV1A.0168s0020.3.p
Myb
645
704
RTKWKPEEVKSLIKLRGELHSRFQVVRGRMALWEEISTNLMADGINRSPGQCKYLWTSLA
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.824
SapurV1A.0841s0060
Salix purpurea
SapurV1A.0841s0060
N
0.815
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.697
Bra038629
Brassica rapa
Bra038629
N
0.697
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.697
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.697
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.697
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.694
emb2746
Arabidopsis thaliana
AT5G63420
N
0.676
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.676
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.676
mgf010338m
Mimulus guttatus
mgf010338m
N
0.661