CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30074.m001421
(
Ricinus communis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
30074.m001421
T047892_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.858
0.933
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.858
0.933
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30074.m001421
bHLH
199
243
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVG
Links
Other
bHLH
family TFs
Other
Ricinus communis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU06744
Neurospora crassa
NCU06744
D
NEUTE1DRAFT_84072
Neurospora tetrasperma
NEUTE1DRAFT_84072
I
SMAC_06735
Sordaria macrospora
SMAC_06735
I