CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_2310009
(
Physcomitrella patens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh1_pg.C_2310009
T048331_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_2310009
bHLH
327
377
QRENHIWSERQRRKGMNYLFSTLRSLLPHPTSKTDKSTVVGEIIKYIESLQ
Links
Other
bHLH
family TFs
Other
Physcomitrella patens
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10013209m.g
Citrus clementina
Ciclev10013209m.g
N
LjSGA_010689.2
Lotus japonicus
LjSGA_010689.2
N
SapurV1A.1252s0010
Salix purpurea
SapurV1A.1252s0010
N
MDP0000799392
Malus domestica
MDP0000799392
N
MDP0000320691
Malus domestica
MDP0000320691
N
Gorai.006G021800
Gossypium raimondii
Gorai.006G021800
N
Gorai.001G256200
Gossypium raimondii
Gorai.001G256200
N
evm.TU.supercontig_14.15
Carica papaya
evm.TU.supercontig_14.15
N
Eucgr.J01215
Eucalyptus grandis
Eucgr.J01215
N
Eucgr.B03420
Eucalyptus grandis
Eucgr.B03420
N
GLYMA04G34080
Glycine max
GLYMA04G34080
N
29736.m002007
Ricinus communis
29736.m002007
N
Pm015864
Prunus mume
Pm015864
N
VIT_14s0108g00420
Vitis vinifera
VIT_14s0108g00420
N
TCM_018476
Theobroma cacao
TCM_018476
N
PRUPE_ppa014004mg
Prunus persica
PRUPE_ppa014004mg
N
MTR_6g011670
Medicago truncatula
MTR_6g011670
N
GLYMA19G02510
Glycine max
GLYMA19G02510
N
GLYMA13G05280
Glycine max
GLYMA13G05280
N
GLYMA06G20400
Glycine max
GLYMA06G20400
N