estExt_fgenesh1_pg.C_600113 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh1_pg.C_600113 T048348_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_600113 bHLH 455 498

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4BS_9BFCC52AD Triticum aestivum Traes_4BS_9BFCC52AD N 0.845
chr5.CM0200.480.nc Lotus japonicus chr5.CM0200.480.nc N 0.845
chr5.CM0096.500.nd Lotus japonicus chr5.CM0096.500.nd N 0.845
Thhalv10009862m.g Eutrema salsugineum Thhalv10009862m.g N 0.845
MDP0000946515 Malus domestica MDP0000946515 N 0.844
gene25555-v1.0-hybrid Fragaria vesca gene25555-v1.0-hybrid N 0.845
Carubv10011072m.g Capsella rubella Carubv10011072m.g N 0.845
Cagra.1822s0081 Capsella grandiflora Cagra.1822s0081 N 0.845
Bostr.15697s0100 Boechera stricta Bostr.15697s0100 N 0.845
mgf019332m Mimulus guttatus mgf019332m N 0.845
fgenesh2_pg.scaffold_140000014 Physcomitrella patens fgenesh2_pg.scaffold_140000014 N 0.878
fgenesh1_pg.scaffold_6000069 Physcomitrella patens fgenesh1_pg.scaffold_6000069 N 0.877
fgenesh1_pg.scaffold_164000047 Physcomitrella patens fgenesh1_pg.scaffold_164000047 N 0.914
Pm021172 Prunus mume Pm021172 N 0.845
Traes_4DS_7488F4608 Triticum aestivum Traes_4DS_7488F4608 N 0.845
BHLH54 Arabidopsis thaliana AT1G27740 N 0.845
Traes_4AL_6A6EC9A6A Triticum aestivum Traes_4AL_6A6EC9A6A N 0.845
SELMODRAFT_419388 Selaginella moellendorffii SELMODRAFT_419388 N 0.879
SELMODRAFT_404767 Selaginella moellendorffii SELMODRAFT_404767 N 0.879
MLOC_34429 Hordeum vulgare MLOC_34429 N 0.840
RSL4 Arabidopsis lyrata fgenesh2_kg.1__2933__AT1G27740.1 N 0.845
F775_27628 Aegilops tauschii F775_27628 N 0.845
F775_09323 Aegilops tauschii F775_09323 N 0.882
Bra032846 Brassica rapa Bra032846 N 0.845
Bra030063 Brassica rapa Bra030063 N 0.845
Bra010921 Brassica rapa Bra010921 N 0.845
Bo7g048630 Brassica oleracea Bo7g048630 N 0.845
Bo5g052310 Brassica oleracea Bo5g052310 N 0.845
Bo3g142890 Brassica oleracea Bo3g142890 N 0.845