CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_1.10182
(
Pichia stipitis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh1_pg.C_chr_1.10182
T048360_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_1.10182
bHLH
486
540
KKASHKLAEQGRRNRMNMAVLELGSLIPQVYHDEVAIPSKATTVELASKYIRALL
Links
Other
bHLH
family TFs
Other
Pichia stipitis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_077410
Albugo laibachii
ALNC14_077410
N
F443_15086
Phytophthora parasitica
F443_15086
N
fgenesh_scip_prom.28083.6775
Phytophthora lateralis
fgenesh_scip_prom.28083.6775
N
Phyra83594
Phytophthora ramorum
Phyra83594
N
Physo135098
Phytophthora sojae
Physo135098
N
PYU1_G009725
Pythium ultimum
PYU1_G009725
N
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
Pythium aphanidermatum
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
N
snap_masked-pve_contig_1278-abinit-gene-0.3
Pythium vexans
snap_masked-pve_contig_1278-abinit-gene-0.3
N