CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-pag1_scaffold_1279-abinit-gene-0.4
(
Pythium aphanidermatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
T027687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000024947
BED ZF
200
245
SFIWDYFVKEANGKYVVCTLCPNNLTRFAYSGGTSTMNRHLRKKHQ
Links
Other
BED ZF
family TFs
Other
Pythium aphanidermatum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_36-snap-gene-0.22
Pythium arrhenomanes
maker-par_contig_36-snap-gene-0.22
N
0.907
F443_15086
Phytophthora parasitica
F443_15086
N
0.837
PYU1_G009725
Pythium ultimum
PYU1_G009725
N
0.837
fgenesh_scip_prom.28083.6775
Phytophthora lateralis
fgenesh_scip_prom.28083.6775
N
0.814
Phyra83594
Phytophthora ramorum
Phyra83594
N
0.814
Physo135098
Phytophthora sojae
Physo135098
N
0.814
ALNC14_077410
Albugo laibachii
ALNC14_077410
N
0.744
snap_masked-pve_contig_1278-abinit-gene-0.3
Pythium vexans
snap_masked-pve_contig_1278-abinit-gene-0.3
N
0.721