CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-par_contig_36-snap-gene-0.22
(
Pythium arrhenomanes
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-par_contig_36-snap-gene-0.22
T026883_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000013675
BED ZF
220
265
SFIWDYFVKEANGKFVVCTLCPSNVTRFAYSGGTSTMNRHLRKKHH
Links
Other
BED ZF
family TFs
Other
Pythium arrhenomanes
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
Pythium aphanidermatum
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
N
0.907
fgenesh_scip_prom.28083.6775
Phytophthora lateralis
fgenesh_scip_prom.28083.6775
N
0.884
Phyra83594
Phytophthora ramorum
Phyra83594
N
0.884
Physo135098
Phytophthora sojae
Physo135098
N
0.860
F443_15086
Phytophthora parasitica
F443_15086
N
0.837
PYU1_G009725
Pythium ultimum
PYU1_G009725
N
0.791
snap_masked-pve_contig_1278-abinit-gene-0.3
Pythium vexans
snap_masked-pve_contig_1278-abinit-gene-0.3
N
0.767
ALNC14_077410
Albugo laibachii
ALNC14_077410
N
0.744