Gorai.009G090400 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.009G090400 T050063_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G090400.1 bHLH 132 181

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava28523.m1 Manihot esculenta cassava28523.m1 N 0.914
Ciclev10029810m.g Citrus clementina Ciclev10029810m.g N 0.879
Ciclev10003738m.g Citrus clementina Ciclev10003738m.g N 0.841
Carubv10023654m.g Capsella rubella Carubv10023654m.g N 0.894
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N 0.894
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N 0.894
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N 0.890
mgf025442m Mimulus guttatus mgf025442m N 0.855
mgf022253m Mimulus guttatus mgf022253m N 0.855
Cucsa.385700 Cucumis sativus Cucsa.385700 N 0.914
Ciclev10030052m.g Citrus clementina Ciclev10030052m.g N 0.879
Pm001154 Prunus mume Pm001154 N 0.911
Cla008847 Citrullus lanatus Cla008847 N 0.914
Ca_17453 Cicer arietinum Ca_17453 N 0.866
FIT1 Vitis vinifera VIT_06s0061g00720 N 0.890
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N 0.890
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N 0.890
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N 0.890
TCM_041590 Theobroma cacao TCM_041590 N 0.914
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N 0.887
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N 0.914
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N 0.914
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N 0.914
PK27980.1 Cannabis sativa PK27980.1 N 0.860
PK26582.1 Cannabis sativa PK26582.1 N 0.914
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N 0.894
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N 0.914
Pavir.J29678 Panicum virgatum Pavir.J29678 N 0.866
Pavir.J28741 Panicum virgatum Pavir.J28741 N 0.890
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N 0.903
orange1.1g042465m.g Citrus sinensis orange1.1g042465m.g N 0.879
orange1.1g021355m.g Citrus sinensis orange1.1g021355m.g N 0.879
MDP0000421809 Malus domestica MDP0000421809 N 0.845
Lus10016151.g Linum usitatissimum Lus10016151.g N 0.879
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N 0.914
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N 0.894
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N 0.914
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N 0.914
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N 0.890
LPERR04G07210 Leersia perrieri LPERR04G07210 N 0.890
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N 0.890
GRMZM2G173521 Zea mays GRMZM2G173521 N 0.890
GRMZM2G107672 Zea mays GRMZM2G107672 N 0.890
GLYMA13G39650 Glycine max GLYMA13G39650 N 0.914
GLYMA12G30240 Glycine max GLYMA12G30240 N 0.903
GLYMA12G08640 Glycine max GLYMA12G08640 N 0.870
GLYMA11G19850 Glycine max GLYMA11G19850 N 0.890
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N 0.894
MLOC_6707 Hordeum vulgare MLOC_6707 N 0.890
Bra034392 Brassica rapa Bra034392 N 0.870
Bra011972 Brassica rapa Bra011972 N 0.894
Bra000495 Brassica rapa Bra000495 N 0.894
Bo4g165090 Brassica oleracea Bo4g165090 N 0.870
Bo4g071850 Brassica oleracea Bo4g071850 N 0.894
Bo3g040310 Brassica oleracea Bo3g040310 N 0.894
FIT Arabidopsis thaliana AT2G28160 N 0.894
AMTR_s00102p00056000 Amborella trichopoda AMTR_s00102p00056000 N 0.875
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N 0.890
Si010533m.g Setaria italica Si010533m.g N 0.890
Si010468m.g Setaria italica Si010468m.g N 0.890
Sb06g012030 Sorghum bicolor Sb06g012030 N 0.890
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N 0.911
FIT1 Populus trichocarpa POPTR_0009s01100 N 0.914
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N 0.903
OS04G0381700 Oryza sativa OS04G0381700 N 0.890
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N 0.890
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N 0.890
AMTR_s00102p00046460 Amborella trichopoda AMTR_s00102p00046460 N 0.875
OPUNC04G08160 Oryza punctata OPUNC04G08160 N 0.890
ONIVA04G07960 Oryza nivara ONIVA04G07960 N 0.890
OLONG_016577 Oryza longistaminata OLONG_016577 N 0.890
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N 0.890
OBART04G10120 Oryza barthii OBART04G10120 N 0.890
OB04G17410 Oryza brachyantha OB04G17410 N 0.890
MTR_4g057270 Medicago truncatula MTR_4g057270 N 0.870
MTR_2g084280 Medicago truncatula MTR_2g084280 N 0.894