CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.012G117300
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.012G117300
T050109_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G117300.1
bHLH
52
97
QSVAARERRHRISDRFKILQSMVPGGTKMDTVSMLDEAIHYVKFLK
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10013640m.g
Citrus clementina
Ciclev10013640m.g
N
0.856
TCM_021641
Theobroma cacao
TCM_021641
N
0.914
Traes_3B_D6EA106A51
Triticum aestivum
Traes_3B_D6EA106A51
N
0.893
TRAES3BF030500010CFD_g
Triticum aestivum
TRAES3BF030500010CFD_g
N
0.893
TRAES3BF030600030CFD_g
Triticum aestivum
TRAES3BF030600030CFD_g
N
0.893
VIT_08s0058g00110
Vitis vinifera
VIT_08s0058g00110
N
0.914
Ca_09396
Cicer arietinum
Ca_09396
N
0.914
Cla018363
Citrullus lanatus
Cla018363
N
0.914
Pm002868
Prunus mume
Pm002868
N
0.914
cassava41569.m1
Manihot esculenta
cassava41569.m1
N
0.914
Cucsa.130030
Cucumis sativus
Cucsa.130030
N
0.914
mg005373m
Mimulus guttatus
mg005373m
N
0.870
Aquca_045_00179
Aquilegia coerulea
Aquca_045_00179
N
0.914
Bostr.6251s0101
Boechera stricta
Bostr.6251s0101
N
0.914
Cagra.4082s0011
Capsella grandiflora
Cagra.4082s0011
N
0.914
Solyc09g005070.1
Solanum lycopersicum
Solyc09g005070.1
N
0.888
evm.TU.supercontig_120.27
Carica papaya
evm.TU.supercontig_120.27
N
0.914
gene13480-v1.0-hybrid
Fragaria vesca
gene13480-v1.0-hybrid
N
0.894
Lus10002213.g
Linum usitatissimum
Lus10002213.g
N
0.866
Lus10003386.g
Linum usitatissimum
Lus10003386.g
N
0.893
MDP0000178778
Malus domestica
MDP0000178778
N
0.901
MDP0000436338
Malus domestica
MDP0000436338
N
0.901
orange1.1g039972m.g
Citrus sinensis
orange1.1g039972m.g
N
0.856
Pavir.Ea03297
Panicum virgatum
Pavir.Ea03297
N
0.893
Pavir.J06869
Panicum virgatum
Pavir.J06869
N
0.893
SapurV1A.0001s0420
Salix purpurea
SapurV1A.0001s0420
N
0.914
SapurV1A.0905s0090
Salix purpurea
SapurV1A.0905s0090
N
0.914
Thhalv10012562m.g
Eutrema salsugineum
Thhalv10012562m.g
N
0.914
LjSGA_012662.1
Lotus japonicus
LjSGA_012662.1
N
0.914
OBART01G36050
Oryza barthii
OBART01G36050
N
0.893
BGIOSGA004736
Oryza indica
BGIOSGA004736
N
0.880
Bo2g001330
Brassica oleracea
Bo2g001330
N
0.890
Bra028895
Brassica rapa
Bra028895
N
0.890
BRADI2G54030
Brachypodium distachyon
BRADI2G54030
N
0.893
APTX
Arabidopsis lyrata
fgenesh2_kg.6__80__AT5G01310.1
N
0.894
GLYMA01G30660
Glycine max
GLYMA01G30660
N
0.914
GLYMA03G06792
Glycine max
GLYMA03G06792
N
0.914
GLYMA0732S00200
Glycine max
GLYMA0732S00200
N
0.893
GLYMA07G18651
Glycine max
GLYMA07G18651
N
0.869
GRMZM2G397518
Zea mays
GRMZM2G397518
N
0.893
GSMUA_Achr4G18820_001
Musa acuminata
GSMUA_Achr4G18820_001
N
0.914
LPERR01G31030
Leersia perrieri
LPERR01G31030
N
0.893
MLOC_54157
Hordeum vulgare
MLOC_54157
N
0.893
MTR_7g069590
Medicago truncatula
MTR_7g069590
N
0.899
AT5G01305
Arabidopsis thaliana
AT5G01305
N
0.914
OGLUM01G39950
Oryza glumaepatula
OGLUM01G39950
N
0.893
OMERI01G33130
Oryza meridionalis
OMERI01G33130
N
0.893
ONIVA01G41030
Oryza nivara
ONIVA01G41030
N
0.893
OPUNC01G34850
Oryza punctata
OPUNC01G34850
N
0.893
ORGLA01G0299600
Oryza glaberrima
ORGLA01G0299600
N
0.893
ORGLA06G0253200
Oryza glaberrima
ORGLA06G0253200
N
0.893
ORUFI01G39410
Oryza rufipogon
ORUFI01G39410
N
0.893
LAX
Oryza sativa
OS01G0831000
N
0.893
POPTR_0006s10350
Populus trichocarpa
POPTR_0006s10350
N
0.914
POPTR_0016s12830
Populus trichocarpa
POPTR_0016s12830
N
0.914
PRUPE_ppa025490mg
Prunus persica
PRUPE_ppa025490mg
N
0.914
Sb03g038820
Sorghum bicolor
Sb03g038820
N
0.893
Si004520m.g
Setaria italica
Si004520m.g
N
0.893